Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P15124

Metabolite ID
P15124
Deionized mass
908.4265 Da
Average m/z
909.4348
Average RT
11.9364
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G209300 hypothetical protein NA 2Chr06:20573671–20581076 (-)2.871e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)5.555e-11
Glyma.09G018700 hypothetical protein NA 2Chr09:1470411–1472672 (-)2.964e-12
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)9.884e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.798e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.798e-13
Glyma.02G121500 hypothetical protein NA 1Chr02:12065640–12082937 (+)4.821e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.356e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.46e-11
Glyma.06G207900 hypothetical protein NA 1Chr06:20278974–20282107 (-)1.458e-11
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 1Chr06:20286288–20288769 (+)1.458e-11
Glyma.06G208900 hypothetical protein NA 1Chr06:20515068–20521900 (-)1.458e-11
Glyma.06G209400 hypothetical protein NA 1Chr06:20622369–20629712 (+)1.458e-11
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:20638577–20641470 (+)1.458e-11
Glyma.06G210000 hypothetical protein NA 1Chr06:20706632–20708144 (-)1.458e-11
Glyma.06G210100 hypothetical protein NA 1Chr06:20725481–20728890 (-)1.458e-11
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 1Chr06:20768340–20778709 (-)1.458e-11
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 1Chr06:20942818–20945744 (+)1.458e-11
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 1Chr06:21104409–21114116 (-)1.458e-11
Glyma.06G211700 hypothetical protein NA 1Chr06:21226061–21226529 (-)2.279e-11
Glyma.06G211800 hypothetical protein NA 1Chr06:21237649–21239875 (+)2.279e-11
Glyma.06G213600 hypothetical protein NA 1Chr06:21713618–21726865 (+)2.279e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)4.8e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)7.637e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)6.013e-13
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)6.013e-13
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)3.194e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)3.194e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)5.555e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)5.555e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)5.555e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)5.555e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.202e-11
Glyma.09G110000 hypothetical protein NA 1Chr09:21593730–21602127 (+)1.908e-11
Glyma.09G111200 hypothetical protein AT3G12110:ACT11:actin-11 1Chr09:22031217–22034701 (+)4.424e-11
Glyma.09G187700 hypothetical protein AT3G24420:AT3G24420:alpha/beta-Hydrolases superfamily protein 1Chr09:41217358–41221592 (-)9.433e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)2.455e-11
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr12:36001658–36004086 (+)5.594e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)8.227e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.063e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)4.134e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.458e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)2.458e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.588e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.723e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.352e-13
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)3.219e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)5.045e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)6.37e-11