Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P15095

Metabolite ID
P15095
Deionized mass
332.1868 Da
Average m/z
333.1906
Average RT
11.9322
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
107
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

107 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)9.003e-11
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)3.587e-13
Glyma.08G123500 hypothetical protein NA 3Chr08:9494946–9505931 (-)2.127e-12
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)3.902e-11
Glyma.02G006500 hypothetical protein AT4G01660:ABC1:ABC transporter 1 2Chr02:693193–700260 (+)2.242e-11
Glyma.05G149900 hypothetical protein NA 2Chr05:34389242–34393621 (-)1.744e-13
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)3.599e-12
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)9.452e-12
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)9.452e-12
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)9.452e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.14e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.14e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.254e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)9.003e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)8.967e-11
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)5.352e-11
Glyma.01G176400 hypothetical protein AT1G63810:AT1G63810:nucleolar protein 1Chr01:51285599–51295173 (-)2.841e-11
Glyma.02G044600 hypothetical protein NA 1Chr02:4131829–4134877 (+)2.361e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.139e-14
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)9.027e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)2.997e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.034e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)6.051e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)4.87e-13
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)5.615e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)3.559e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)7.254e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.885e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)9.343e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)9.343e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)9.343e-11
Glyma.05G149200 hypothetical protein NA 1Chr05:34347910–34353885 (-)4.903e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)6.794e-12
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)4.512e-11
Glyma.05G224200 hypothetical protein NA 1Chr05:40307329–40312025 (+)1.358e-13
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)5.595e-11
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)1.631e-11
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)1.631e-11
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)1.631e-11
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)1.631e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)2.83e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)3.587e-13
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)3.587e-13
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)5.656e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)6.292e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)5.804e-14
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)8.887e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)8.887e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)8.887e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)8.887e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)2.469e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)4.16e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.383e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)3.236e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)1.038e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)4.881e-12
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)9.452e-12
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)9.452e-12
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)9.452e-12
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)2.314e-12
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)9.452e-12
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)9.452e-12
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)4.443e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)6.399e-11
Glyma.10G055100 hypothetical protein AT1G33410:SAR1:SUPPRESSOR OF AUXIN RESISTANCE1 1Chr10:5015329–5032990 (+)2.193e-12
Glyma.10G055300 hypothetical protein AT5G03380:AT5G03380:Heavy metal transport/detoxification superfamily protein 1Chr10:5044375–5046444 (+)5.113e-11
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)6.934e-11
Glyma.12G028800 hypothetical protein AT1G50300:TAF15:TBP-associated factor 15 1Chr12:2148313–2153234 (-)8.856e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)8.665e-15
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.106e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.106e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)9.665e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)9.665e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.14e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)8.635e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)6.524e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)6.524e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)6.525e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)5.696e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)3.25e-14
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)3.646e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.08e-12
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)3.525e-12
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)1.118e-12
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)1.118e-12
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)2.633e-12
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)8.423e-12
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)8.423e-12
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)3.902e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)3.902e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)3.902e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)3.902e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.129e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.062e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)8.543e-13
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)8.98e-11
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)4.745e-11
Glyma.16G205600 hypothetical protein AT4G10280:AT4G10280:RmlC-like cupins superfamily protein__AT4G10290:AT4G10290:RmlC-like cupins superfamily protein 1Chr16:36633000–36634978 (+)1.863e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)1.201e-12
Glyma.17G251800 hypothetical protein NA 1Chr17:40633579–40636068 (+)6.164e-11
Glyma.17G251900 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 1Chr17:40641019–40644794 (+)6.164e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)5.306e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)5.307e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.351e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.35e-13
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)6.872e-13
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr20:44820994–44827443 (+)6.782e-12