Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P14752

Metabolite ID
P14752
Deionized mass
919.2666 Da
Average m/z
920.2714
Average RT
11.8414
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
52
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

52 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G161500 hypothetical protein NA 6Chr16:32076715–32092322 (-)2.689e-12
Glyma.16G196900 hypothetical protein NA 5Chr16:35841279–35846894 (-)1.679e-14
Glyma.14G171400 hypothetical protein NA 3Chr14:42398866–42404627 (+)1.593e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 3Chr16:35170253–35173950 (-)2.612e-14
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)4.641e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.65e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.391e-13
Glyma.16G159100 hypothetical protein NA 2Chr16:31889835–31894662 (+)1.56e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)4.164e-19
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.259e-16
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.23e-14
Glyma.03G223000 hypothetical protein AT1G02500:SAM1:S-adenosylmethionine synthetase 1 1Chr03:42579900–42582675 (+)9.511e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.05e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.617e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)2.867e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)2.867e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.21e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)9.154e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)9.154e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)9.154e-13
Glyma.05G130600 hypothetical protein AT1G30040:GA2OX2:gibberellin 2-oxidase 1Chr05:32352085–32354865 (+)6.659e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)7.718e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)7.718e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.189e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.487e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.252e-14
Glyma.09G167000 hypothetical protein NA 1Chr09:39103764–39109664 (-)1.19e-13
Glyma.10G032400 hypothetical protein AT2G30575:LGT5:los glycosyltransferase 5 1Chr10:2816643–2821287 (-)3.135e-12
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)2.551e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)8.052e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)3.366e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)3.954e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)3.954e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)3.954e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)3.954e-12
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)6.498e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.806e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.806e-11
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)2.505e-11
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)6.857e-12
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)6.857e-12
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)1.4e-13
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.391e-13
Glyma.14G150000 hypothetical protein AT1G21830:AT1G21830:uncharacterized protein 1Chr14:32314092–32316626 (+)2.96e-11
Glyma.14G171200 hypothetical protein AT1G19970:AT1G19970:ER lumen protein retaining receptor family protein 1Chr14:42387905–42389129 (+)1.593e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)5.944e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)5.944e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.333e-13
Glyma.16G160900 hypothetical protein NA 1Chr16:32013447–32016235 (+)2.935e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)3.588e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)7.809e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.007e-12