Overview Annotation GWAS Evidence Associated genes

P14407

Metabolite ID
P14407
Deionized mass
332.1400 Da
Average m/z
333.1447
Average RT
11.7412
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
14
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

14 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G036800 TBP1 AT3G13445:TBP1:TATA binding protein 1 2Chr03:4472672–4477787 (-)9.072e-14
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 2Chr05:32421116–32425198 (-)2.382e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 2Chr12:34708678–34710549 (+)4.587e-12
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)3.13e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.17e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)6.622e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)6.622e-11
Glyma.07G101800 hypothetical protein NA 1Chr07:9697246–9703577 (+)8.012e-11
Glyma.12G185400 hypothetical protein AT2G27480:AT2G27480:Calcium-binding EF-hand family protein 1Chr12:34646460–34649191 (-)3e-11
Glyma.12G185900 hypothetical protein AT3G15040:AT3G15040:senescence regulator (Protein of unknown function, DUF584) 1Chr12:34674925–34675653 (+)2.137e-12
Glyma.12G186000 hypothetical protein AT5G09225:AT5G09225:uncharacterized protein 1Chr12:34690356–34692672 (+)7.682e-11
Glyma.12G186300 hypothetical protein NA 1Chr12:34717587–34719271 (+)5.811e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)8.366e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)5.913e-12