Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P14288

Metabolite ID
P14288
Deionized mass
287.1828 Da
Average m/z
288.1891
Average RT
11.7073
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
125
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

125 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)9.551e-14
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)7.635e-13
Glyma.01G045600 hypothetical protein NA 2Chr01:5242432–5245038 (-)4.578e-11
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)3.124e-12
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)7.689e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.005e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.005e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.149e-14
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)6.731e-12
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 2Chr16:30514629–30519598 (+)3.508e-12
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)4.578e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)4.673e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)4.672e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.232e-11
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)7.668e-13
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)7.668e-13
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 1Chr02:47399263–47406220 (-)4.371e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.994e-13
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)9.656e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)6.098e-11
Glyma.04G082800 hypothetical protein NA 1Chr04:6977997–6983005 (-)6.287e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)3.363e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)1.565e-13
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)2.205e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)1.404e-11
Glyma.05G029900 hypothetical protein AT5G62730:AT5G62730:Major facilitator superfamily protein 1Chr05:2565716–2569741 (-)6.846e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.37e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)2.895e-15
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)1.09e-14
Glyma.05G191600 hypothetical protein AT2G13680:CALS5:callose synthase 5 1Chr05:37711639–37726572 (-)3.147e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)7.094e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.599e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.89e-19
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.547e-19
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.744e-15
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)3.759e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.636e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.636e-13
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)2.352e-13
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)2.556e-13
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)3.267e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)4.753e-11
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)8.427e-11
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)4.367e-12
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)8.751e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)8.751e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)6.592e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)6.372e-12
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)1.95e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)9.103e-11
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)5.834e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.015e-12
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)2.047e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)4.297e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.419e-18
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.435e-16
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)1.416e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)2.892e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)6.247e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.952e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)5.362e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)6.542e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)6.542e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)6.542e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)6.542e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)6.947e-14
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)9.383e-11
Glyma.12G183700 hypothetical protein AT2G27600:SKD1:AAA-type ATPase family protein 1Chr12:34470517–34477475 (-)1.336e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)1.585e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.904e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.904e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)3.858e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.974e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)1.267e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)5.504e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)5.504e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)7.042e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)9.326e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)9.551e-14
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)7.768e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.296e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.296e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.005e-12
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)1.044e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)1.209e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)1.513e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.495e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)1.964e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)6.687e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)6.687e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)8.966e-13
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.357e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.71e-16
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.357e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.357e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.599e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.635e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)3.47e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)9.963e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)3.416e-11
Glyma.16G138400 hypothetical protein NA 1Chr16:29560913–29562163 (+)6.488e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)1.389e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)2.445e-14
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)2.445e-14
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)2.367e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)2.367e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)5.533e-13
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)5.222e-16
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)6.697e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)1.704e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)4.884e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)4.809e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)4.809e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)4.379e-12
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)2.802e-13
Glyma.18G231500 hypothetical protein NA 1Chr18:52019138–52019828 (-)2.047e-11
Glyma.18G242900 hypothetical protein NA 1Chr18:53113341–53119592 (-)1.407e-11
Glyma.18G257800 hypothetical protein NA 1Chr18:54346048–54349189 (+)4.415e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.604e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.605e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)6.079e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)3.328e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)7.494e-13
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)8.148e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)3.577e-11