Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P14280

Metabolite ID
P14280
Deionized mass
393.1909 Da
Average m/z
394.1954
Average RT
11.7053
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)1.892e-12
Glyma.15G140700 hypothetical protein NA 3Chr15:11520847–11522863 (-)7.643e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)9.697e-13
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)3.572e-11
Glyma.19G009000 hypothetical protein AT5G14780:FDH:formate dehydrogenase 2Chr19:860974–865476 (+)1.8e-13
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)3.896e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)4.369e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.585e-11
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)1.281e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)3.677e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)7.291e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)7.291e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)7.93e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.361e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.361e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.361e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.231e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.281e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.281e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)7.76e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.696e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.696e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.696e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.696e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.285e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)6.3e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)6.3e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)7.38e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)4.756e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)4.756e-12
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)1.032e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)3.572e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.382e-14
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)3.382e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)3.382e-14
Glyma.15G140900 hypothetical protein AT3G66658:ALDH22A1:aldehyde dehydrogenase 22A1 1Chr15:11538070–11545857 (-)3.553e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)2.572e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)1.892e-12
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)4.226e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.292e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)6.233e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)4.652e-11
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)2.916e-11