Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P14241

Metabolite ID
P14241
Deionized mass
201.0613 Da
Average m/z
202.0698
Average RT
11.6962
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
108
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

108 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G147300 hypothetical protein NA 6Chr08:11238871–11242682 (+)4.728e-19
Glyma.08G147500 hypothetical protein AT3G18680:AT3G18680:Amino acid kinase family protein 4Chr08:11253074–11256505 (+)6.518e-14
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)1.336e-14
Glyma.08G141200 hypothetical protein NA 2Chr08:10789258–10792803 (-)9.904e-12
Glyma.08G142400 WRKY6 WRKY transcription factor 6 NA 2Chr08:10843433–10846761 (-)6.096e-13
Glyma.08G144000 hypothetical protein NA 2Chr08:10981530–10989743 (+)6.096e-13
Glyma.13G224800 hypothetical protein NA 2Chr13:33748627–33756494 (-)4.386e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)7.716e-14
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)6.769e-13
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.775e-11
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)1.771e-13
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)5.64e-16
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)3.344e-15
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)2.519e-16
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)2.519e-16
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)2.519e-16
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)2.519e-16
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)2.519e-16
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)2.519e-16
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)2.519e-16
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)1.336e-14
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)5.1e-13
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.711e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.711e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)2.497e-12
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)5.047e-11
Glyma.03G020800 hypothetical protein AT3G61050:NTMC2T4:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr03:2124895–2135692 (-)4.528e-12
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)2.982e-12
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)9.431e-13
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)1.314e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.683e-11
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)3.225e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.094e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.022e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)6.734e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)6.734e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)4.481e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)8.398e-11
Glyma.07G068300 hypothetical protein AT5G62980:FOLB2:Dihydroneopterin aldolase__AT3G11750:FOLB1:Dihydroneopterin aldolase 1Chr07:6169729–6172231 (+)7.982e-11
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1Chr07:6173172–6180430 (-)5.483e-11
Glyma.07G068600 hypothetical protein NA 1Chr07:6192764–6197166 (+)5.483e-11
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)3.661e-11
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)3.661e-11
Glyma.07G069100 hypothetical protein NA 1Chr07:6246145–6250192 (+)5.483e-11
Glyma.07G071000 hypothetical protein AT4G00480:ATMYC1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr07:6464646–6470484 (+)3.32e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)2.608e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)5.997e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.069e-13
Glyma.08G104600 hypothetical protein AT1G27930:AT1G27930:glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 1Chr08:8045602–8047222 (-)3.203e-11
Glyma.08G111700 hypothetical protein NA 1Chr08:8604527–8606424 (-)4.153e-11
Glyma.08G141500 hypothetical protein AT4G39540:SK2:shikimate kinase 2 1Chr08:10806339–10811196 (-)9.904e-12
Glyma.08G143000 hypothetical protein AT3G57940:AT3G57940:GNAT acetyltransferase (DUF699)__AT1G10490:AT1G10490:GNAT acetyltransferase (DUF699) 1Chr08:10872816–10885213 (-)6.096e-13
Glyma.08G143200 hypothetical protein AT4G39420:AT4G39420:spatacsin carboxy-terminus protein 1Chr08:10898111–10922975 (-)6.096e-13
Glyma.08G144600 hypothetical protein NA 1Chr08:10997491–11002758 (+)6.096e-13
Glyma.08G144700 hypothetical protein NA 1Chr08:11004138–11009322 (-)6.096e-13
Glyma.08G145700 hypothetical protein AT5G64730:AT5G64730:Transducin/WD40 repeat-like superfamily protein 1Chr08:11083230–11086950 (-)1.105e-11
Glyma.08G145900 hypothetical protein AT4G39330:CAD9:cinnamyl alcohol dehydrogenase 9 1Chr08:11092669–11096142 (-)1.105e-11
Glyma.08G146100 hypothetical protein NA 1Chr08:11119305–11124078 (+)1.693e-12
Glyma.08G147200 hypothetical protein AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 1Chr08:11225587–11227445 (+)8.347e-17
Glyma.08G147400 hypothetical protein AT1G48870:AT1G48870:Transducin/WD40 repeat-like superfamily protein 1Chr08:11248804–11251957 (+)1.711e-11
Glyma.09G019800 VAMP721D vesicle-associated membrane protein 721d NA 1Chr09:1540660–1547761 (+)5.643e-11
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)9.338e-13
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.326e-12
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)1.298e-12
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)3.441e-12
Glyma.09G060600 hypothetical protein AT3G28430:AT3G28430:CLEC16A-like protein 1Chr09:5661672–5675338 (-)2.292e-11
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)1.599e-11
Glyma.09G075500 hypothetical protein NA 1Chr09:8234794–8241097 (+)8.456e-11
Glyma.09G075600 hypothetical protein AT1G34630:AT1G34630:uncharacterized protein 1Chr09:8255346–8260648 (-)8.456e-11
Glyma.09G078300 hypothetical protein AT4G29400:AT4G29400:oxidoreductase/transition metal ion-binding protein (DUF3531) 1Chr09:8708840–8718819 (-)8.456e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)2.554e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.343e-17
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.315e-15
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)1.2e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)5.71e-12
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)4.805e-11
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)2.617e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.327e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)7.704e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)7.704e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.85e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)2.85e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)2.85e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)4.7e-14
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)2.962e-13
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)2.962e-13
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)2.962e-13
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)6.724e-14
Glyma.13G204000 hypothetical protein AT3G12650:AT3G12650:uncharacterized protein 1Chr13:31799233–31800440 (+)2.994e-11
Glyma.13G204200 hypothetical protein NA 1Chr13:31822330–31826011 (+)5.128e-11
Glyma.13G224500 hypothetical protein AT1G29750:RKF1:receptor-like kinase in flowers 1 1Chr13:33725180–33735368 (+)4.386e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)2.157e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)9.241e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)1.719e-11
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)5.102e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)3.083e-12
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)3.083e-12
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)2.387e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.749e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)8.443e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)8.443e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)3.056e-12
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)4.876e-12
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)3.479e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)6.884e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.74e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.739e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.358e-11