Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P13911

Metabolite ID
P13911
Deionized mass
714.1565 Da
Average m/z
715.1685
Average RT
11.6018
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
99
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

99 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)3.452e-12
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)3.508e-12
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.517e-14
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.031e-13
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)1.584e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)4.844e-14
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)2.204e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 2Chr06:48170133–48173010 (-)8.015e-13
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)4.38e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)4.392e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)3.196e-16
Glyma.12G212300 hypothetical protein AT3G58710:WRKY69:WRKY DNA-binding protein 69 2Chr12:37131153–37134096 (+)2.051e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)5.016e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)5.016e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)4.889e-13
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)7.084e-14
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.517e-14
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)8.917e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)2.58e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.414e-12
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)2.14e-11
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)2.648e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.33e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)8.79e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)2.598e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)2.598e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)2.598e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.101e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.101e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)4.934e-12
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)7.264e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)1.1e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)7.264e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)7.264e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)1.1e-11
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)3.775e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)2.594e-15
Glyma.07G019900 hypothetical protein AT1G79870:AT1G79870:D-isomer specific 2-hydroxyacid dehydrogenase family protein 1Chr07:1561952–1564494 (+)5.319e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)5.668e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)5.668e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)3.491e-11
Glyma.08G139300 hypothetical protein AT2G22125:CSI1:binding protein 1Chr08:10653279–10664544 (-)5.301e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.295e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.295e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.295e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.295e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.33e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)6.715e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)6.482e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)6.482e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)6.482e-11
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)5.602e-12
Glyma.11G182700 hypothetical protein AT1G32250:AT1G32250:Calcium-binding EF-hand family protein 1Chr11:25028353–25031056 (-)1.618e-11
Glyma.12G096000 hypothetical protein AT1G08465:YAB2:Plant-specific transcription factor YABBY family protein 1Chr12:8080306–8088711 (-)7.941e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.365e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.365e-13
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr12:36001658–36004086 (+)1.298e-15
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.167e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.167e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)8.3e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.283e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.196e-16
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)4.612e-14
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)5.541e-12
Glyma.12G212800 hypothetical protein NA 1Chr12:37179924–37185798 (-)5.563e-11
Glyma.13G051000 hypothetical protein AT1G19920:APS2:Pseudouridine synthase/archaeosine transglycosylase-like family protein 1Chr13:14742455–14747878 (-)5.79e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.495e-13
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.031e-13
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)1.233e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.265e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.265e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.016e-12
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)7.501e-12
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)7.501e-12
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)7.501e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)9.506e-13
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)4.889e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.929e-12
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)3.452e-12
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)4.331e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)1.584e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)1.584e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)1.584e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)1.584e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)8.087e-11
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)9.761e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)2.204e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)2.204e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)2.623e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.855e-14
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)4.867e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)4.867e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)6.63e-11
Glyma.18G052300 hypothetical protein NA 1Chr18:4521958–4525815 (+)6.973e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)3.714e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.779e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.779e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)5.049e-12
Glyma.20G022500 hypothetical protein NA 1Chr20:2342943–2353164 (+)7.992e-11