Overview Annotation GWAS Evidence Associated genes

P13906

Metabolite ID
P13906
Deionized mass
126.1038 Da
Average m/z
127.1108
Average RT
11.6006
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
19
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

19 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)1.075e-12
Glyma.17G217900 hypothetical protein NA 3Chr17:36771760–36778616 (-)6.511e-11
Glyma.16G105100 hypothetical protein NA 2Chr16:21259552–21267517 (-)8.801e-13
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)2.723e-11
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)3.446e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)9.088e-12
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)2.652e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.997e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.034e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.997e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.997e-14
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)5.664e-12
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)3.284e-12
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)4.925e-14
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)1.075e-12
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)2.739e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)7.779e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)1.161e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)2.723e-11