Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P13651

Metabolite ID
P13651
Deionized mass
297.1184 Da
Average m/z
298.1252
Average RT
11.5111
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
53
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

53 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)4.913e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)1.716e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)6.793e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)4.756e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.532e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.532e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)8.193e-12
Glyma.03G135600 hypothetical protein NA 1Chr03:35109981–35110632 (-)4.61e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)9.984e-11
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)6.778e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.601e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)6.59e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.408e-12
Glyma.06G204200 hypothetical protein AT5G08050:AT5G08050:wiskott-aldrich syndrome family protein, putative (DUF1118) 1Chr06:19170925–19173352 (+)8.351e-11
Glyma.06G211700 hypothetical protein NA 1Chr06:21226061–21226529 (-)2.496e-11
Glyma.06G211800 hypothetical protein NA 1Chr06:21237649–21239875 (+)2.496e-11
Glyma.06G213600 hypothetical protein NA 1Chr06:21713618–21726865 (+)2.496e-11
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)8.15e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)7.238e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)8.34e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)1.61e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)1.234e-13
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)1.234e-13
Glyma.08G114200 hypothetical protein AT4G08810:SUB1:calcium ion binding protein 1Chr08:8743328–8745667 (-)5.069e-11
Glyma.08G114400 hypothetical protein AT4G25650:ACD1-LIKE:ACD1-like protein 1Chr08:8750828–8756629 (-)5.069e-11
Glyma.08G114500 hypothetical protein AT4G38500:AT4G38500:Sept9 (DUF616) 1Chr08:8757033–8762145 (+)5.069e-11
Glyma.08G114600 hypothetical protein NA 1Chr08:8763388–8766206 (-)1.796e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)6.182e-11
Glyma.09G060600 hypothetical protein AT3G28430:AT3G28430:CLEC16A-like protein 1Chr09:5661672–5675338 (-)1.766e-12
Glyma.11G037100 hypothetical protein AT2G35660:CTF2A:FAD/NAD(P)-binding oxidoreductase family protein 1Chr11:2678678–2681764 (-)4.495e-12
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)8.805e-13
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.654e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.654e-12
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr12:36001658–36004086 (+)6.42e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.327e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.327e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)8.282e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.15e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.849e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.849e-12
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)7.255e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)4.756e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.1e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.1e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.532e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)8.368e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)7.581e-12
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)4.354e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)4.354e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)4.913e-12
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)2.783e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)6.85e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.071e-11