Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P13229

Metabolite ID
P13229
Deionized mass
226.0834 Da
Average m/z
227.0898
Average RT
11.3973
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
61
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

61 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)4.141e-14
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)1.6e-12
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)1.509e-12
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)3.722e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.979e-13
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)8.296e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)7.977e-13
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)3.646e-12
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)8.42e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)8.42e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)8.42e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)8.42e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)8.42e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)8.42e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)8.42e-11
Glyma.02G115900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 1Chr02:11280858–11285984 (+)4.427e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.328e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.028e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.088e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.597e-20
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.121e-20
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.883e-16
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.949e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.949e-12
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)4.738e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)3.662e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.705e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)3.944e-14
Glyma.07G097000 hypothetical protein AT1G19670:CLH1:chlorophyllase 1 1Chr07:9118318–9120182 (-)6.397e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)2.248e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)9.746e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)6.342e-12
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)7.836e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)7.836e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.811e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)8.594e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.811e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.811e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.14e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)7.338e-12
Glyma.16G105700 hypothetical protein NA 1Chr16:21404554–21412265 (-)9.666e-11
Glyma.16G105800 hypothetical protein NA 1Chr16:21409016–21412087 (-)9.666e-11
Glyma.16G106200 hypothetical protein NA 1Chr16:21463300–21469532 (+)9.666e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)4.658e-13
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)4.141e-14
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)9.556e-14
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)8.265e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)7.557e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.787e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)8.859e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.865e-12
Glyma.17G205900 hypothetical protein NA 1Chr17:33578345–33582235 (-)3.415e-11
Glyma.17G206000 hypothetical protein NA 1Chr17:33582328–33583013 (-)3.415e-11
Glyma.17G206100 hypothetical protein NA 1Chr17:33612472–33622199 (-)3.415e-11
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)3.422e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.556e-12
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)1.6e-12
Glyma.17G218800 Peptidyl-prolyl cis-trans isomerase CYP57 AT4G33060:AT4G33060:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 1Chr17:37027171–37033720 (-)9.802e-11
Glyma.18G055400 hypothetical protein NA 1Chr18:4824726–4828902 (+)2.43e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)5.089e-11
Glyma.18G273000 hypothetical protein NA 1Chr18:55575628–55582063 (-)6.043e-11