Overview Annotation GWAS Evidence Associated genes

P12982

Metabolite ID
P12982
Deionized mass
288.1533 Da
Average m/z
289.1621
Average RT
11.3223
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
14
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

14 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 3Chr03:169480–172727 (+)2.317e-11
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)1.251e-11
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)7.865e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.035e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.026e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.035e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.035e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.5e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)2.763e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)7.865e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.644e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)5.504e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)5.504e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)3.323e-11