P12384
Metabolite ID
P12384
Deionized mass
152.0846 Da
Average m/z
153.0919
Average RT
11.0851
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
111
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
111 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.01G045600 | hypothetical protein | NA | 3 | Chr01:5242432–5245038 (-) | 1.419e-11 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 3 | Chr13:24677399–24693129 (-) | 5.442e-12 | |
| Glyma.16G147900 | hypothetical protein | NA | 3 | Chr16:30864919–30872425 (+) | 1.241e-13 | |
| Glyma.04G084800 | hypothetical protein | AT5G11630:NOXY2:uncharacterized protein | 2 | Chr04:7187985–7192897 (+) | 3.14e-11 | |
| Glyma.08G123500 | hypothetical protein | NA | 2 | Chr08:9494946–9505931 (-) | 3.008e-11 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 4.557e-12 | |
| Glyma.16G144700 | hypothetical protein | AT5G66960:AT5G66960:Prolyl oligopeptidase family protein | 2 | Chr16:30514629–30519598 (+) | 1.777e-12 | |
| Glyma.16G145100 | hypothetical protein | NA | 2 | Chr16:30578388–30581421 (-) | 1.097e-14 | |
| Glyma.16G146700 | hypothetical protein | NA | 2 | Chr16:30755899–30759360 (-) | 1.87e-12 | |
| Glyma.16G196900 | hypothetical protein | NA | 2 | Chr16:35841279–35846894 (-) | 6.54e-11 | |
| Glyma.17G215800 | Aberrant root formation protein 4 | AT5G11030:ALF4:aberrant root formation protein | 2 | Chr17:36328551–36338097 (+) | 4.762e-11 | |
| Glyma.18G299100 | hypothetical protein | AT5G13420:TRA2:Aldolase-type TIM barrel family protein | 2 | Chr18:57674222–57678396 (+) | 5.102e-12 | |
| Glyma.01G034700 | hypothetical protein | NA | 1 | Chr01:3599923–3602578 (-) | 5.345e-11 | |
| Glyma.01G045700 | hypothetical protein | AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… | 1 | Chr01:5265956–5271379 (-) | 1.419e-11 | |
| Glyma.01G169700 | hypothetical protein | AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 | 1 | Chr01:50715084–50719427 (-) | 6.733e-13 | |
| Glyma.01G169800 | hypothetical protein | AT4G36400:D2HGDH:FAD-linked oxidases family protein | 1 | Chr01:50726088–50733347 (-) | 6.733e-13 | |
| Glyma.02G205300 | hypothetical protein | NA | 1 | Chr02:39037472–39038396 (-) | 8.187e-11 | |
| Glyma.02G295900 | hypothetical protein | NA | 1 | Chr02:47375932–47378006 (+) | 7.489e-11 | |
| Glyma.02G296200 | hypothetical protein | AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 | 1 | Chr02:47383044–47395946 (-) | 7.489e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 3.306e-13 | |
| Glyma.03G040600 | hypothetical protein | AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 | 1 | Chr03:5113019–5121557 (+) | 3.397e-13 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 4.901e-12 | |
| Glyma.04G084300 | hypothetical protein | AT2G25800:AT2G25800:elongation factor Ts (DUF810) | 1 | Chr04:7153009–7158438 (+) | 2.311e-11 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 4.09e-12 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 1.564e-11 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 1.564e-11 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 1.564e-11 | |
| Glyma.05G137500 | hypothetical protein | NA | 1 | Chr05:33012282–33015297 (-) | 1.416e-12 | |
| Glyma.05G137600 | hypothetical protein | NA | 1 | Chr05:33018107–33020120 (-) | 3.214e-12 | |
| Glyma.05G224700 | hypothetical protein | NA | 1 | Chr05:40351005–40361888 (+) | 1.708e-11 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 1 | Chr05:40458098–40461736 (+) | 2.894e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 1.883e-19 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 3.376e-20 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 6.983e-16 | |
| Glyma.06G019800 | hypothetical protein | NA | 1 | Chr06:1494230–1501925 (+) | 5.364e-11 | |
| Glyma.06G313500 | hypothetical protein | NA | 1 | Chr06:50191600–50203098 (-) | 1.435e-11 | |
| Glyma.06G317100 | hypothetical protein | AT5G61520:AT5G61520:Major facilitator superfamily protein | 1 | Chr06:50586679–50589765 (+) | 1.689e-11 | |
| Glyma.08G122000 | hypothetical protein | AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr08:9397717–9410004 (+) | 6.482e-11 | |
| Glyma.08G122200 | hypothetical protein | NA | 1 | Chr08:9416766–9429995 (-) | 3.008e-11 | |
| Glyma.08G122300 | hypothetical protein | AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 | 1 | Chr08:9435391–9437279 (+) | 3.008e-11 | |
| Glyma.08G122500 | hypothetical protein | NA | 1 | Chr08:9441329–9445315 (-) | 3.008e-11 | |
| Glyma.08G122700 | hypothetical protein | AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) | 1 | Chr08:9452604–9458932 (+) | 3.008e-11 | |
| Glyma.08G204800 | hypothetical protein | AT3G16140:PSAH-1:photosystem I subunit H-1 | 1 | Chr08:16601039–16602646 (+) | 1.209e-12 | |
| Glyma.09G058900 | hypothetical protein | NA | 1 | Chr09:5397968–5404650 (-) | 6.151e-11 | |
| Glyma.09G080200 | hypothetical protein | NA | 1 | Chr09:9256042–9263239 (-) | 6.419e-12 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 1.483e-14 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 1.616e-13 | |
| Glyma.09G246700 | hypothetical protein | AT1G22840:CYTC-1:CYTOCHROME C-1 | 1 | Chr09:46835469–46838091 (-) | 3.747e-11 | |
| Glyma.10G078700 | hypothetical protein | NA | 1 | Chr10:8882318–8903950 (+) | 1.182e-11 | |
| Glyma.10G079100 | hypothetical protein | NA | 1 | Chr10:8960669–8962364 (-) | 1.182e-11 | |
| Glyma.10G079800 | hypothetical protein | NA | 1 | Chr10:9223520–9228511 (-) | 1.182e-11 | |
| Glyma.10G080000 | hypothetical protein | AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… | 1 | Chr10:9258476–9260697 (-) | 1.182e-11 | |
| Glyma.10G081200 | hypothetical protein | NA | 1 | Chr10:9600771–9603988 (-) | 7.327e-12 | |
| Glyma.10G081700 | hypothetical protein | NA | 1 | Chr10:9752508–9758422 (+) | 2.768e-13 | |
| Glyma.11G048300 | hypothetical protein | AT4G37640:ACA2:calcium ATPase 2 | 1 | Chr11:3601241–3607177 (+) | 1.411e-12 | |
| Glyma.11G050300 | hypothetical protein | AT2G23093:AT2G23093:Major facilitator superfamily protein | 1 | Chr11:3765453–3771565 (+) | 1.003e-11 | |
| Glyma.11G050500 | hypothetical protein | AT5G67370:CGLD27:DUF1230 family protein (DUF1230) | 1 | Chr11:3778152–3782174 (+) | 1.003e-11 | |
| Glyma.11G050600 | hypothetical protein | NA | 1 | Chr11:3779988–3786583 (-) | 1.003e-11 | |
| Glyma.11G051600 | hypothetical protein | NA | 1 | Chr11:3857225–3859564 (-) | 1.003e-11 | |
| Glyma.11G064300 | hypothetical protein | AT4G36780:BEH2:BES1/BZR1 homolog 2 | 1 | Chr11:4849799–4851673 (+) | 1.756e-11 | |
| Glyma.12G183400 | hypothetical protein | NA | 1 | Chr12:34427496–34440319 (-) | 2.983e-11 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 8.453e-12 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 8.453e-12 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 9.746e-11 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 2.349e-13 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 2.349e-13 | |
| Glyma.13G053000 | hypothetical protein | AT3G02230:RGP1:reversibly glycosylated polypeptide 1 | 1 | Chr13:15046821–15050021 (+) | 3.079e-11 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 9.692e-11 | |
| Glyma.13G134500 | hypothetical protein | AT3G09560:PAH1:Lipin family protein | 1 | Chr13:24696109–24705068 (-) | 5.442e-12 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 4.865e-11 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 4.865e-11 | |
| Glyma.13G135700 | hypothetical protein | NA | 1 | Chr13:24812720–24818735 (+) | 4.865e-11 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 1 | Chr13:24820151–24823999 (-) | 4.865e-11 | |
| Glyma.13G161900 | PAP25 | purple acid phosphatase | AT5G34850:PAP26:purple acid phosphatase 26 | 1 | Chr13:27748190–27752685 (-) | 9.486e-12 |
| Glyma.14G201600 | hypothetical protein | NA | 1 | Chr14:46703283–46706500 (+) | 6.528e-12 | |
| Glyma.14G201700 | hypothetical protein | NA | 1 | Chr14:46711634–46715644 (-) | 6.528e-12 | |
| Glyma.15G035600 | hypothetical protein | AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III | 1 | Chr15:2830678–2835534 (+) | 1.474e-12 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 2.43e-14 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 3.618e-14 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 2.43e-14 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 2.43e-14 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 1.548e-12 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 9.467e-12 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 1 | Chr16:26324650–26336836 (+) | 7.936e-12 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 4.274e-12 | |
| Glyma.16G144100 | hypothetical protein | NA | 1 | Chr16:30432951–30434052 (-) | 2.008e-11 | |
| Glyma.16G145200 | hypothetical protein | NA | 1 | Chr16:30586018–30588859 (-) | 5.83e-11 | |
| Glyma.16G145300 | hypothetical protein | AT2G35780:scpl26:serine carboxypeptidase-like 26__AT3G07990:SCPL27:serine carboxypeptidase-like 27 | 1 | Chr16:30604586–30608656 (+) | 4.539e-12 | |
| Glyma.16G145400 | hypothetical protein | AT3G12090:TET6:tetraspanin6 | 1 | Chr16:30624348–30627475 (+) | 9.769e-11 | |
| Glyma.16G145500 | hypothetical protein | AT2G39200:MLO12:Seven transmembrane MLO family protein | 1 | Chr16:30630177–30636253 (+) | 2.325e-12 | |
| Glyma.16G145600 | hypothetical protein | AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… | 1 | Chr16:30652378–30659548 (+) | 1.097e-14 | |
| Glyma.16G146300 | hypothetical protein | NA | 1 | Chr16:30714315–30716624 (+) | 1.87e-12 | |
| Glyma.16G147000 | hypothetical protein | NA | 1 | Chr16:30773803–30777822 (-) | 4.216e-13 | |
| Glyma.16G147400 | hypothetical protein | NA | 1 | Chr16:30817535–30821568 (+) | 3.645e-11 | |
| Glyma.16G179800 | hypothetical protein | AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein | 1 | Chr16:34022480–34027055 (-) | 8.57e-11 | |
| Glyma.17G064000 | hypothetical protein | AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein | 1 | Chr17:4924830–4930155 (-) | 1.151e-11 | |
| Glyma.17G064200 | hypothetical protein | AT5G57500:AT5G57500:Galactosyltransferase family protein | 1 | Chr17:4943412–4944357 (-) | 1.151e-11 | |
| Glyma.17G215500 | KNAT5 | NA | 1 | Chr17:36212363–36217688 (-) | 4.592e-11 | |
| Glyma.17G215700 | hypothetical protein | AT5G11040:TRS120:TRS120 | 1 | Chr17:36319785–36329259 (-) | 4.762e-11 | |
| Glyma.18G021700 | hypothetical protein | NA | 1 | Chr18:1590986–1596262 (-) | 7.59e-11 | |
| Glyma.18G108400 | hypothetical protein | NA | 1 | Chr18:12370997–12390275 (-) | 7.223e-11 | |
| Glyma.18G263900 | hypothetical protein | AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein | 1 | Chr18:54907058–54912936 (-) | 2.999e-11 | |
| Glyma.18G266100 | hypothetical protein | NA | 1 | Chr18:55052591–55056489 (-) | 7.223e-14 | |
| Glyma.18G266400 | hypothetical protein | AT3G29390:RIK:RS2-interacting KH protein | 1 | Chr18:55076548–55086297 (+) | 2.462e-11 | |
| Glyma.18G266500 | hypothetical protein | NA | 1 | Chr18:55088284–55091427 (-) | 2.748e-12 | |
| Glyma.18G267500 | hypothetical protein | NA | 1 | Chr18:55179516–55181798 (-) | 5.388e-11 | |
| Glyma.18G298600 | hypothetical protein | AT1G44960:AT1G44960:SNARE associated Golgi protein family | 1 | Chr18:57614292–57617223 (+) | 3.254e-12 | |
| Glyma.18G298800 | hypothetical protein | NA | 1 | Chr18:57633577–57639546 (+) | 1.822e-11 | |
| Glyma.19G005200 | hypothetical protein | AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein | 1 | Chr19:472201–476152 (-) | 7.342e-12 | |
| Glyma.20G019500 | hypothetical protein | AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme | 1 | Chr20:2039210–2040459 (+) | 5.274e-11 | |
| Glyma.20G107200 | hypothetical protein | AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein | 1 | Chr20:34984922–34988496 (+) | 2.254e-11 |