P12097
Metabolite ID
P12097
Deionized mass
280.0570 Da
Average m/z
281.0634
Average RT
10.9899
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
100
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
100 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.04G084800 | hypothetical protein | AT5G11630:NOXY2:uncharacterized protein | 2 | Chr04:7187985–7192897 (+) | 3.554e-14 | |
| Glyma.09G274700 | hypothetical protein | NA | 2 | Chr09:49057465–49065986 (-) | 2.578e-11 | |
| Glyma.09G275800 | hypothetical protein | NA | 2 | Chr09:49116424–49122191 (-) | 2.578e-11 | |
| Glyma.09G276100 | hypothetical protein | AT2G38510:AT2G38510:MATE efflux family protein | 2 | Chr09:49139110–49143810 (-) | 2.578e-11 | |
| Glyma.09G277300 | hypothetical protein | NA | 2 | Chr09:49271634–49276648 (-) | 2.198e-12 | |
| Glyma.12G203700 | hypothetical protein | AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase | 2 | Chr12:36406747–36413696 (+) | 3.055e-15 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 2 | Chr12:36473422–36498915 (+) | 4.508e-15 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 2 | Chr13:24677399–24693129 (-) | 3.471e-11 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 4.711e-14 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 2 | Chr16:26324650–26336836 (+) | 1.621e-12 | |
| Glyma.16G146700 | hypothetical protein | NA | 2 | Chr16:30755899–30759360 (-) | 9.449e-12 | |
| Glyma.17G215800 | Aberrant root formation protein 4 | AT5G11030:ALF4:aberrant root formation protein | 2 | Chr17:36328551–36338097 (+) | 6.404e-11 | |
| Glyma.18G100200 | hypothetical protein | NA | 2 | Chr18:10512806–10522231 (+) | 1.224e-12 | |
| Glyma.01G169700 | hypothetical protein | AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 | 1 | Chr01:50715084–50719427 (-) | 7.996e-12 | |
| Glyma.01G169800 | hypothetical protein | AT4G36400:D2HGDH:FAD-linked oxidases family protein | 1 | Chr01:50726088–50733347 (-) | 7.996e-12 | |
| Glyma.02G044600 | hypothetical protein | NA | 1 | Chr02:4131829–4134877 (+) | 1.558e-12 | |
| Glyma.02G086900 | hypothetical protein | AT3G24130:AT3G24130:Pectin lyase-like superfamily protein | 1 | Chr02:7553127–7557516 (-) | 3.887e-12 | |
| Glyma.02G133800 | hypothetical protein | AT1G49660:CXE5:carboxyesterase 5 | 1 | Chr02:13850366–13851962 (-) | 6.465e-12 | |
| Glyma.02G303600 | hypothetical protein | NA | 1 | Chr02:47883626–47887124 (-) | 5.928e-11 | |
| Glyma.02G303700 | hypothetical protein | NA | 1 | Chr02:47892900–47896207 (+) | 5.928e-11 | |
| Glyma.02G304000 | hypothetical protein | AT1G51350:AT1G51350:ARM repeat superfamily protein | 1 | Chr02:47908136–47915999 (-) | 5.928e-11 | |
| Glyma.03G021400 | hypothetical protein | AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein | 1 | Chr03:2202325–2234931 (+) | 5.411e-12 | |
| Glyma.03G147400 | hypothetical protein | NA | 1 | Chr03:36293698–36295294 (+) | 7.648e-11 | |
| Glyma.03G177700 | hypothetical protein | NA | 1 | Chr03:39046772–39051158 (+) | 1.094e-12 | |
| Glyma.04G082800 | hypothetical protein | NA | 1 | Chr04:6977997–6983005 (-) | 9.902e-13 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 2.241e-17 | |
| Glyma.04G084300 | hypothetical protein | AT2G25800:AT2G25800:elongation factor Ts (DUF810) | 1 | Chr04:7153009–7158438 (+) | 3.888e-15 | |
| Glyma.04G086600 | hypothetical protein | NA | 1 | Chr04:7374806–7380808 (+) | 2.684e-12 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 4.526e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 3.251e-17 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 2.24e-21 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 4.743e-12 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 2.714e-13 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 2.714e-13 | |
| Glyma.06G260200 | hypothetical protein | AT1G60690:AT1G60690:NAD(P)-linked oxidoreductase superfamily protein__AT1G60710:ATB2:NAD(P)-linked oxidoreductase super… | 1 | Chr06:44529441–44533552 (-) | 6.49e-11 | |
| Glyma.06G260300 | hypothetical protein | AT1G60730:AT1G60730:NAD(P)-linked oxidoreductase superfamily protein | 1 | Chr06:44535490–44539648 (-) | 6.49e-11 | |
| Glyma.06G261900 | hypothetical protein | NA | 1 | Chr06:44875369–44879702 (-) | 2.372e-11 | |
| Glyma.06G291600 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr06:48024204–48029614 (+) | 4.962e-11 | |
| Glyma.06G291800 | hypothetical protein | NA | 1 | Chr06:48044194–48047197 (-) | 8.052e-12 | |
| Glyma.06G292000 | hypothetical protein | NA | 1 | Chr06:48081084–48084476 (-) | 4.962e-11 | |
| Glyma.06G292100 | hypothetical protein | NA | 1 | Chr06:48095366–48097378 (+) | 4.962e-11 | |
| Glyma.06G292200 | hypothetical protein | AT5G44290:AT5G44290:Protein kinase superfamily protein | 1 | Chr06:48100578–48107433 (-) | 8.052e-12 | |
| Glyma.06G313500 | hypothetical protein | NA | 1 | Chr06:50191600–50203098 (-) | 7.272e-11 | |
| Glyma.07G015700 | hypothetical protein | AT1G79750:NADP-ME4:NADP-malic enzyme 4 | 1 | Chr07:1244977–1251198 (-) | 4.051e-12 | |
| Glyma.08G122200 | hypothetical protein | NA | 1 | Chr08:9416766–9429995 (-) | 6.691e-11 | |
| Glyma.08G122600 | hypothetical protein | NA | 1 | Chr08:9445153–9450502 (+) | 6.691e-11 | |
| Glyma.09G080200 | hypothetical protein | NA | 1 | Chr09:9256042–9263239 (-) | 1.806e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 4.931e-14 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 4.443e-13 | |
| Glyma.09G209200 | hypothetical protein | AT1G32160:AT1G32160:beta-casein (DUF760) | 1 | Chr09:43361634–43365478 (-) | 1.485e-11 | |
| Glyma.09G209900 | hypothetical protein | AT1G31930:XLG3:extra-large GTP-binding protein 3 | 1 | Chr09:43412726–43419532 (+) | 6.85e-11 | |
| Glyma.09G274900 | hypothetical protein | AT5G02280:AT5G02280:SNARE-like superfamily protein | 1 | Chr09:49069946–49073277 (-) | 2.578e-11 | |
| Glyma.09G275100 | hypothetical protein | AT3G08760:ATSIK:Protein kinase superfamily protein | 1 | Chr09:49079101–49084269 (-) | 2.578e-11 | |
| Glyma.09G275300 | hypothetical protein | NA | 1 | Chr09:49094668–49096996 (-) | 2.577e-11 | |
| Glyma.09G275500 | hypothetical protein | NA | 1 | Chr09:49105837–49106989 (+) | 4.701e-12 | |
| Glyma.09G275900 | hypothetical protein | AT5G01850:AT5G01850:Protein kinase superfamily protein | 1 | Chr09:49128687–49133154 (-) | 2.578e-11 | |
| Glyma.09G276000 | hypothetical protein | NA | 1 | Chr09:49131662–49132187 (+) | 2.578e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 2.989e-11 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 2.989e-11 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 5.779e-12 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 5.779e-12 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 4.616e-12 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 4.616e-12 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:36289704–36295084 (-) | 5.509e-13 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 6.409e-17 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 4.508e-15 | |
| Glyma.12G204600 | hypothetical protein | AT4G28310:AT4G28310:microtubule-associated protein | 1 | Chr12:36504234–36505245 (+) | 1.377e-12 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 3.471e-11 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 8.532e-12 | |
| Glyma.13G135700 | hypothetical protein | NA | 1 | Chr13:24812720–24818735 (+) | 8.532e-12 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 1 | Chr13:24820151–24823999 (-) | 8.532e-12 | |
| Glyma.13G156000 | hypothetical protein | AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 | 1 | Chr13:27104338–27109785 (+) | 5.02e-12 | |
| Glyma.13G203200 | hypothetical protein | AT3G52105:AT3G52105:DIS3-exonuclease-like protein | 1 | Chr13:31720004–31725252 (+) | 5.789e-12 | |
| Glyma.13G203300 | hypothetical protein | AT3G63530:BB:RING/U-box superfamily protein | 1 | Chr13:31727841–31735910 (-) | 5.789e-12 | |
| Glyma.13G203700 | hypothetical protein | NA | 1 | Chr13:31780982–31784218 (+) | 5.789e-12 | |
| Glyma.13G203900 | hypothetical protein | NA | 1 | Chr13:31793697–31796601 (-) | 6.076e-13 | |
| Glyma.16G050500 | AFB3B | auxin signaling F-box 3 protein | AT3G26810:AFB2:auxin signaling F-box 2 | 1 | Chr16:4853237–4856710 (+) | 2.827e-13 |
| Glyma.16G050900 | COL16 | NA | 1 | Chr16:4874634–4878624 (+) | 7.747e-12 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 8.286e-11 | |
| Glyma.16G119300 | hypothetical protein | NA | 1 | Chr16:26643902–26644416 (+) | 2.203e-12 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 4.023e-11 | |
| Glyma.16G121500 | hypothetical protein | NA | 1 | Chr16:27007186–27010856 (+) | 4.972e-12 | |
| Glyma.16G139100 | hypothetical protein | NA | 1 | Chr16:29632332–29634248 (-) | 8.226e-11 | |
| Glyma.16G146300 | hypothetical protein | NA | 1 | Chr16:30714315–30716624 (+) | 9.449e-12 | |
| Glyma.16G179800 | hypothetical protein | AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein | 1 | Chr16:34022480–34027055 (-) | 1.723e-12 | |
| Glyma.16G209300 | hypothetical protein | NA | 1 | Chr16:36856833–36863994 (-) | 2.36e-11 | |
| Glyma.17G215700 | hypothetical protein | AT5G11040:TRS120:TRS120 | 1 | Chr17:36319785–36329259 (-) | 6.404e-11 | |
| Glyma.18G021700 | hypothetical protein | NA | 1 | Chr18:1590986–1596262 (-) | 5.803e-11 | |
| Glyma.18G098900 | hypothetical protein | NA | 1 | Chr18:10297476–10305043 (+) | 1.7e-11 | |
| Glyma.18G099000 | hypothetical protein | AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein | 1 | Chr18:10326925–10347143 (-) | 1.7e-11 | |
| Glyma.18G099600 | hypothetical protein | AT4G27040:VPS22:EAP30/Vps36 family protein | 1 | Chr18:10453308–10458891 (-) | 1.224e-12 | |
| Glyma.18G099700 | hypothetical protein | AT5G54860:AT5G54860:Major facilitator superfamily protein | 1 | Chr18:10459970–10464888 (-) | 9.71e-13 | |
| Glyma.18G099900 | hypothetical protein | AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… | 1 | Chr18:10471443–10475076 (+) | 1.224e-12 | |
| Glyma.18G201700 | hypothetical protein | NA | 1 | Chr18:48175554–48180264 (+) | 5.737e-11 | |
| Glyma.18G263900 | hypothetical protein | AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein | 1 | Chr18:54907058–54912936 (-) | 5.054e-11 | |
| Glyma.19G009400 | hypothetical protein | AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein | 1 | Chr19:885045–893253 (+) | 2.603e-11 | |
| Glyma.20G019500 | hypothetical protein | AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme | 1 | Chr20:2039210–2040459 (+) | 1.612e-13 | |
| Glyma.20G019700 | hypothetical protein | NA | 1 | Chr20:2047020–2050862 (-) | 1.714e-12 | |
| Glyma.20G019800 | hypothetical protein | AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein | 1 | Chr20:2051817–2057262 (+) | 1.252e-16 | |
| Glyma.20G107200 | hypothetical protein | AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein | 1 | Chr20:34984922–34988496 (+) | 3.088e-11 |