Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P11981

Metabolite ID
P11981
Deionized mass
714.1616 Da
Average m/z
715.1696
Average RT
10.9437
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
53
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

53 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)4.041e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)4.041e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)4.041e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)2.357e-11
Glyma.10G272800 hypothetical protein AT1G25350:OVA9:glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS 2Chr10:49530856–49539222 (+)2.403e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.153e-11
Glyma.01G021600 hypothetical protein AT5G65540:AT5G65540:transcription initiation factor TFIID subunit 1Chr01:2189923–2194362 (-)6.174e-11
Glyma.01G022300 hypothetical protein NA 1Chr01:2215383–2217438 (+)9.278e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)5.555e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)3.671e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)3.671e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.235e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.606e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.607e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.606e-12
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)1.813e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.237e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)9.878e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.241e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.241e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)7.442e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)4.909e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)3.423e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)3.423e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)4.056e-14
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)4.041e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)4.041e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)4.041e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)4.012e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)4.041e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)4.041e-11
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)7.449e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)5.092e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)5.092e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)5.092e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)5.092e-12
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)8.468e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)5.098e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)2.888e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)1.504e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.402e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.711e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.402e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.402e-13
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)7.178e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.286e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)8.414e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)8.414e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)6.19e-11
Glyma.17G251800 hypothetical protein NA 1Chr17:40633579–40636068 (+)2.099e-12
Glyma.17G251900 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 1Chr17:40641019–40644794 (+)2.099e-12
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)2.401e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)4.028e-11