Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P11737

Metabolite ID
P11737
Deionized mass
666.1451 Da
Average m/z
667.1505
Average RT
10.8755
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
66
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

66 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G201700 hypothetical protein NA 3Chr06:18577883–18617874 (+)2.436e-12
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)1.415e-13
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)1.303e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.731e-13
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)1.031e-13
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 1Chr02:47399263–47406220 (-)7.36e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.026e-13
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)3.497e-11
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)2.659e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)4.672e-12
Glyma.06G202000 hypothetical protein AT5G07940:AT5G07940:dentin sialophosphoprotein-like protein 1Chr06:18655235–18667810 (-)3.934e-11
Glyma.06G202200 hypothetical protein AT1G74310:HSP101:heat shock protein 101 1Chr06:18712866–18716868 (+)3.981e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)8.509e-12
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)9.904e-12
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)9.904e-12
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)7.052e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)2.384e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)4.017e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.356e-15
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.786e-16
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)6.27e-15
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 1Chr09:42685911–42690981 (-)7.727e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)6.433e-11
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)6.682e-11
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)4.943e-11
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)4.943e-11
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)4.943e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.035e-11
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 1Chr10:9934486–9960586 (-)4.891e-12
Glyma.11G061800 hypothetical protein NA 1Chr11:4632831–4633552 (+)2.682e-16
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.303e-13
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)8.89e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)7.077e-11
Glyma.14G013500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 1Chr14:1009519–1014238 (+)2.175e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.648e-11
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)8.596e-11
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)8.596e-11
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)8.596e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)4.313e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)5.771e-12
Glyma.15G108100 hypothetical protein NA 1Chr15:8500878–8505582 (-)4.68e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)9.875e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.56e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)9.875e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)9.875e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.956e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.471e-14
Glyma.16G018000 hypothetical protein NA 1Chr16:1601748–1607341 (-)4.954e-11
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)8.401e-13
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)5.546e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)1.831e-13
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)1.831e-13
Glyma.16G032000 hypothetical protein AT4G01270:AT4G01270:RING/U-box superfamily protein 1Chr16:3031286–3036010 (+)2.256e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)1.03e-11
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)6.078e-11
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)3.724e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)2.704e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.919e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)3.094e-11
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)6.621e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)5.961e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.647e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.647e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)6.119e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.916e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)7.981e-13