Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P10944

Metabolite ID
P10944
Deionized mass
506.2106 Da
Average m/z
507.2163
Average RT
10.6142
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.89e-12
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)2.38e-11
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)6.724e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)4.059e-15
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.8e-13
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)3.096e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.89e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)1.429e-13
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)1.319e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.282e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.282e-11
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)3.191e-11
Glyma.02G044600 hypothetical protein NA 1Chr02:4131829–4134877 (+)1.024e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)4.449e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.525e-13
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)8.769e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)7.73e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)7.969e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.551e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)2.38e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)2.38e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.216e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)8.73e-11
Glyma.08G123500 hypothetical protein NA 1Chr08:9494946–9505931 (-)1.975e-12
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)9.948e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)9.948e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.194e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.352e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)3.4e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)7.743e-11
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)8.099e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)5.308e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.268e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.181e-12
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)6.724e-12
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)6.724e-12
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)6.724e-12
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)6.724e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.644e-13
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)3.606e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)8.408e-14
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)1.01e-11
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)7.402e-12
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)3.096e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.407e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.407e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)8.075e-11