Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P10336

Metabolite ID
P10336
Deionized mass
434.1172 Da
Average m/z
435.1252
Average RT
10.4140
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
78
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

78 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)5.128e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)2.084e-11
Glyma.03G020800 hypothetical protein AT3G61050:NTMC2T4:Calcium-dependent lipid-binding (CaLB domain) family protein 2Chr03:2124895–2135692 (-)1.701e-13
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 2Chr03:2240686–2246512 (-)2.48e-16
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)2.682e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 2Chr03:44064511–44073939 (+)1.047e-13
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 2Chr05:32421116–32425198 (-)1.215e-11
Glyma.09G018700 hypothetical protein NA 2Chr09:1470411–1472672 (-)1.381e-13
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)2.97e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)5.128e-11
Glyma.01G009700 hypothetical protein NA 1Chr01:952611–956924 (+)2.127e-11
Glyma.02G062600 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr02:5645621–5648965 (+)3.895e-11
Glyma.02G121500 hypothetical protein NA 1Chr02:12065640–12082937 (+)2.236e-11
Glyma.03G016900 hypothetical protein NA 1Chr03:1702419–1707451 (+)9.887e-12
Glyma.03G017000 hypothetical protein AT3G61060:PP2-A13:phloem protein 2-A13 1Chr03:1716204–1719596 (+)4.717e-11
Glyma.03G017500 hypothetical protein NA 1Chr03:1761083–1762800 (+)8.233e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)9.034e-11
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 1Chr03:2202325–2234931 (+)1.283e-13
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)1.623e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)1.062e-12
Glyma.03G022500 hypothetical protein NA 1Chr03:2339702–2345448 (+)2.53e-11
Glyma.03G022900 hypothetical protein NA 1Chr03:2409690–2420328 (-)2.3e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)5.374e-11
Glyma.04G220400 hypothetical protein AT5G10020:AT5G10020:Leucine-rich receptor-like protein kinase family protein 1Chr04:49102263–49108229 (+)3.854e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.008e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.008e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.008e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.747e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.747e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)5.72e-15
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.504e-12
Glyma.06G136200 hypothetical protein AT5G54170:AT5G54170:Polyketide cyclase/dehydrase and lipid transport superfamily protein 1Chr06:11160066–11162505 (-)3.371e-11
Glyma.06G276300 hypothetical protein NA 1Chr06:46741410–46744086 (-)2.833e-11
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 1Chr07:6146155–6148036 (-)1.745e-11
Glyma.07G068300 hypothetical protein AT5G62980:FOLB2:Dihydroneopterin aldolase__AT3G11750:FOLB1:Dihydroneopterin aldolase 1Chr07:6169729–6172231 (+)2.166e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)8.903e-13
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)3.948e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.466e-11
Glyma.09G019300 hypothetical protein AT1G52520:FRS6:FAR1-related sequence 6 1Chr09:1514278–1517148 (+)7.631e-11
Glyma.09G019400 hypothetical protein AT1G55270:AT1G55270:Galactose oxidase/kelch repeat superfamily protein 1Chr09:1518046–1520807 (+)8.94e-11
Glyma.09G019800 VAMP721D vesicle-associated membrane protein 721d NA 1Chr09:1540660–1547761 (+)4.356e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.643e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)1.18e-13
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)2.129e-13
Glyma.11G244100 hypothetical protein NA 1Chr11:33781539–33789678 (-)1.322e-11
Glyma.11G244200 SEOi AT1G67790:AT1G67790:sieve element occlusion protein 1Chr11:33797151–33801124 (+)4.397e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)3.181e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)2.084e-11
Glyma.14G013500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 1Chr14:1009519–1014238 (+)1.698e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)9.827e-13
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)5.422e-13
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)3.201e-14
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)5.791e-16
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)4.897e-12
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)7.288e-13
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)2.431e-11
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)2.431e-11
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)2.431e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)1.54e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.639e-11
Glyma.16G115800 hypothetical protein NA 1Chr16:25719040–25728740 (-)8.217e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.532e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.9e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.512e-12
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)3.419e-11
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)2.525e-12
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)5.289e-11
Glyma.18G106700 hypothetical protein NA 1Chr18:11956201–11957138 (-)9.2e-11
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 1Chr18:11959920–11966545 (-)9.2e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)8.626e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)2.892e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)3.341e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)3.341e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1134716–1143232 (+)7.862e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.055e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.055e-11
Glyma.20G221400 hypothetical protein NA 1Chr20:45645388–45648171 (-)1.913e-11
Glyma.20G222300 hypothetical protein AT2G20410:AT2G20410:RNA-binding ASCH domain protein 1Chr20:45708496–45710397 (-)1.913e-11