Overview Annotation GWAS Evidence Associated genes

P10311

Metabolite ID
P10311
Deionized mass
554.1802 Da
Average m/z
555.1831
Average RT
10.4085
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
149
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

149 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G105300 hypothetical protein AT4G38470:STY46:ACT-like protein tyrosine kinase family protein 6Chr20:34757381–34771672 (+)2.254e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 4Chr19:3303658–3312907 (-)3.369e-17
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.369e-17
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)7.226e-16
Glyma.08G226000 hypothetical protein AT3G13062:AT3G13062:Polyketide cyclase/dehydrase and lipid transport superfamily protein 3Chr08:18321377–18335864 (-)1.535e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 3Chr16:30652378–30659548 (+)3.486e-12
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)2.45e-12
Glyma.01G045600 hypothetical protein NA 2Chr01:5242432–5245038 (-)8.68e-11
Glyma.06G168700 hypothetical protein AT5G63520:AT5G63520:F-box/LRR protein 2Chr06:14104416–14111842 (+)4.49e-13
Glyma.06G305300 hypothetical protein NA 2Chr06:49431590–49435985 (-)7.226e-16
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.225e-11
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)8.574e-12
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)8.574e-12
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)8.574e-12
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)9.488e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)2.15e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)1.116e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.831e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.831e-14
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.865e-13
Glyma.16G139000 hypothetical protein NA 2Chr16:29623540–29631451 (+)7.855e-13
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)1.604e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)1.093e-12
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)2.569e-11
Glyma.17G251200 hypothetical protein NA 2Chr17:40605249–40607536 (+)1.138e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 2Chr19:1155711–1161298 (-)3.129e-24
Glyma.19G012300 hypothetical protein NA 2Chr19:1165111–1173031 (-)3.129e-24
Glyma.19G026200 hypothetical protein AT5G39420:cdc2cAt:CDC2C 2Chr19:3274957–3281320 (+)4.918e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.359e-14
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)1.098e-14
Glyma.01G032400 hypothetical protein NA 1Chr01:3404831–3411453 (+)1.962e-11
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)8.68e-11
Glyma.01G174300 hypothetical protein NA 1Chr01:51115502–51120201 (+)9.631e-12
Glyma.01G174600 hypothetical protein AT5G66740:AT5G66740:spindle assembly abnormal protein (DUF620) 1Chr01:51138854–51141103 (+)9.631e-12
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr01:56022128–56026001 (+)5.725e-11
Glyma.02G116900 hypothetical protein NA 1Chr02:11394318–11395331 (-)3.513e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)5.885e-11
Glyma.04G018000 hypothetical protein AT5G42310:AT5G42310:Pentatricopeptide repeat (PPR-like) superfamily protein 1Chr04:1402993–1407323 (-)4.555e-15
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 1Chr04:50558708–50569783 (+)2.564e-12
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:50576216–50582296 (-)2.564e-12
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … 1Chr04:50604264–50609423 (+)2.564e-12
Glyma.05G029900 hypothetical protein AT5G62730:AT5G62730:Major facilitator superfamily protein 1Chr05:2565716–2569741 (-)5.187e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)5.908e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)8.846e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)8.846e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.407e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)1.369e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.471e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)8.061e-13
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)2.6e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.519e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.227e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)2.664e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.8e-17
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.8e-17
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)2.525e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)3.192e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)8.813e-13
Glyma.06G175200 SEOd NA 1Chr06:14822478–14829186 (-)8.59e-12
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)2.548e-12
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)2.638e-12
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)5.222e-12
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)5.222e-12
Glyma.06G305100 hypothetical protein NA 1Chr06:49413291–49417661 (-)3.505e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)7.226e-16
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.265e-14
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.949e-14
Glyma.08G031900 hypothetical protein AT4G29230:NAC075:NAC domain containing protein 75 1Chr08:2547941–2553643 (+)9.192e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.225e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.225e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.225e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.225e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)1.473e-13
Glyma.08G226100 hypothetical protein AT3G13060:ECT5:evolutionarily conserved C-terminal region 5 1Chr08:18339384–18347070 (-)1.536e-12
Glyma.08G226400 hypothetical protein AT3G13050:NiaP:Major facilitator superfamily protein 1Chr08:18370226–18374060 (-)1.536e-12
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)1.55e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)5.721e-16
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)4.953e-14
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)2.218e-11
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)2.98e-11
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)8.288e-12
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)2.67e-12
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)1.924e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)5.773e-15
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)5.773e-15
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)3.933e-12
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)6.505e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)1.141e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)8.574e-12
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)8.574e-12
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)8.574e-12
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)7.764e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)8.574e-12
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)8.574e-12
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)5.704e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)1.232e-12
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)1.232e-12
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.759e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)5.555e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)5.555e-13
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)3.211e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)3.211e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.116e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)5.456e-12
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)5.544e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.079e-14
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.079e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.831e-14
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)2.631e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)4.542e-13
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)4.542e-13
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)4.26e-13
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)6.679e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)1.615e-11
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)3.534e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.661e-15
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)1.4e-11
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)4.642e-12
Glyma.16G143400 hypothetical protein NA 1Chr16:30337469–30338390 (-)1.315e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)3.486e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)7.119e-11
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)1.765e-11
Glyma.16G157800 hypothetical protein NA 1Chr16:31832373–31834430 (-)6.984e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)7.184e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)6.228e-12
Glyma.17G205900 hypothetical protein NA 1Chr17:33578345–33582235 (-)4.119e-11
Glyma.17G206000 hypothetical protein NA 1Chr17:33582328–33583013 (-)4.119e-11
Glyma.17G206100 hypothetical protein NA 1Chr17:33612472–33622199 (-)4.119e-11
Glyma.17G214600 hypothetical protein NA 1Chr17:36049053–36054871 (-)5.123e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)6.319e-18
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)1.093e-12
Glyma.17G251300 hypothetical protein AT1G19520:NFD5:pentatricopeptide (PPR) repeat-containing protein 1Chr17:40609523–40612369 (+)7.853e-12
Glyma.17G251700 hypothetical protein NA 1Chr17:40625907–40628028 (-)4.229e-12
Glyma.17G251800 hypothetical protein NA 1Chr17:40633579–40636068 (+)4.598e-14
Glyma.17G251900 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 1Chr17:40641019–40644794 (+)4.598e-14
Glyma.18G009100 hypothetical protein AT1G67620:AT1G67620:Lojap-related protein 1Chr18:662847–665921 (+)9.344e-11
Glyma.18G009200 hypothetical protein NA 1Chr18:667359–671598 (+)9.344e-11
Glyma.18G026200 hypothetical protein AT2G40150:TBL28:TRICHOME BIREFRINGENCE-LIKE 28__AT3G55990:ESK1:trichome birefringence-like protein (DUF828) 1Chr18:1953183–1957001 (-)3.498e-13
Glyma.19G026100 hypothetical protein NA 1Chr19:3271594–3272980 (-)5.924e-11
Glyma.19G147000 hypothetical protein NA 1Chr19:40784257–40785271 (-)3.461e-12
Glyma.19G147100 hypothetical protein NA 1Chr19:40799107–40802473 (+)3.461e-12
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)6.605e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)2.423e-15
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)2.93e-14
Glyma.20G022500 hypothetical protein NA 1Chr20:2342943–2353164 (+)3.617e-11
Glyma.20G104900 hypothetical protein NA 1Chr20:34706863–34713989 (-)2.254e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)3.606e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)1.248e-11
Glyma.20G217700 hypothetical protein AT1G32810:AT1G32810:RING/FYVE/PHD zinc finger superfamily protein 1Chr20:45347424–45357977 (-)1.624e-11