Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P10203

Metabolite ID
P10203
Deionized mass
773.2134 Da
Average m/z
774.2169
Average RT
10.3799
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
40
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

40 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)8.386e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.433e-11
Glyma.15G263500 hypothetical protein AT1G79440:ALDH5F1:aldehyde dehydrogenase 5F1 2Chr15:49664672–49682418 (+)8.603e-11
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)4.037e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)1.065e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.967e-14
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)7.827e-11
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)5.228e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)8.147e-11
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)3.733e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)5.335e-12
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)1.358e-11
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)1.358e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)2.714e-12
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)2.714e-12
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)1.9e-11
Glyma.12G059300 hypothetical protein NA 1Chr12:4289989–4292215 (-)9.504e-11
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr12:36001658–36004086 (+)6.785e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)8.386e-12
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)7.121e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.433e-11
Glyma.14G150000 hypothetical protein AT1G21830:AT1G21830:uncharacterized protein 1Chr14:32314092–32316626 (+)2.768e-11
Glyma.14G150300 hypothetical protein AT4G08330:AT4G08330:uncharacterized protein 1Chr14:32471354–32474446 (-)9.455e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.619e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.157e-16
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)9.397e-11
Glyma.15G262400 hypothetical protein AT1G16310:AT1G16310:Cation efflux family protein__AT1G79520:AT1G79520:Cation efflux family protein 1Chr15:49495728–49499550 (+)4.515e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)8.414e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)8.414e-11
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)6.111e-12
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)6.111e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.47e-14
Glyma.16G189500 hypothetical protein NA 1Chr16:35202920–35206459 (-)5.838e-12
Glyma.17G137100 hypothetical protein AT4G22860:AT4G22860:Cell cycle regulated microtubule associated protein 1Chr17:11065492–11072635 (+)3.773e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.481e-11
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)2.925e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)6.612e-12
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)3.53e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)6.024e-11
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)9.171e-11