P09944
Metabolite ID
P09944
Deionized mass
393.1580 Da
Average m/z
394.1665
Average RT
10.3085
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
126
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
126 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.19G027000 | hypothetical protein | NA | 4 | Chr19:3335896–3343744 (+) | 4.522e-13 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 3 | Chr03:2423540–2428634 (-) | 1.945e-17 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 3 | Chr13:24677399–24693129 (-) | 1.055e-12 | |
| Glyma.05G164700 | hypothetical protein | NA | 2 | Chr05:35543931–35549196 (-) | 1.191e-13 | |
| Glyma.07G021800 | hypothetical protein | AT1G80920:J8:Chaperone DnaJ-domain superfamily protein | 2 | Chr07:1697119–1698666 (+) | 2.614e-12 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 2 | Chr12:36267599–36271584 (+) | 3.472e-19 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 2 | Chr12:36289704–36295084 (-) | 1.195e-15 | |
| Glyma.12G203700 | hypothetical protein | AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase | 2 | Chr12:36406747–36413696 (+) | 2.339e-17 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 2 | Chr12:36473422–36498915 (+) | 3.268e-16 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 3.04e-14 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 3.04e-14 | |
| Glyma.14G201600 | hypothetical protein | NA | 2 | Chr14:46703283–46706500 (+) | 5.536e-13 | |
| Glyma.16G182600 | hypothetical protein | AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 | 2 | Chr16:34364037–34367765 (-) | 2.16e-11 | |
| Glyma.19G026600 | hypothetical protein | AT4G13700:PAP23:purple acid phosphatase 23 | 2 | Chr19:3303658–3312907 (-) | 4.522e-13 | |
| Glyma.20G107200 | hypothetical protein | AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein | 2 | Chr20:34984922–34988496 (+) | 3.187e-12 | |
| Glyma.01G169700 | hypothetical protein | AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 | 1 | Chr01:50715084–50719427 (-) | 4.228e-11 | |
| Glyma.01G169800 | hypothetical protein | AT4G36400:D2HGDH:FAD-linked oxidases family protein | 1 | Chr01:50726088–50733347 (-) | 4.228e-11 | |
| Glyma.03G021700 | hypothetical protein | AT2G45490:AUR3:ataurora3 | 1 | Chr03:2248429–2251737 (+) | 3.421e-12 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 1.443e-13 | |
| Glyma.03G031700 | hypothetical protein | AT1G79600:AT1G79600:Protein kinase superfamily protein | 1 | Chr03:3567906–3572939 (-) | 4.741e-12 | |
| Glyma.03G177700 | hypothetical protein | NA | 1 | Chr03:39046772–39051158 (+) | 4.484e-13 | |
| Glyma.03G209700 | hypothetical protein | NA | 1 | Chr03:41646792–41648527 (+) | 1.28e-11 | |
| Glyma.05G034000 | hypothetical protein | AT4G03400:DFL2:Auxin-responsive GH3 family protein | 1 | Chr05:2965889–2971412 (-) | 1.184e-14 | |
| Glyma.05G124700 | hypothetical protein | NA | 1 | Chr05:31807311–31817648 (+) | 4.942e-13 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 8.885e-15 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 9.447e-15 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 9.447e-15 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 7.151e-16 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 1.88e-15 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 1.88e-15 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 1.88e-15 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 4.202e-12 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 2.287e-11 | |
| Glyma.06G078400 | hypothetical protein | AT4G31290:AT4G31290:ChaC-like family protein | 1 | Chr06:6068728–6071360 (+) | 3.543e-11 | |
| Glyma.06G079400 | hypothetical protein | NA | 1 | Chr06:6105463–6107101 (+) | 2.791e-12 | |
| Glyma.06G081600 | hypothetical protein | AT5G11490:AT5G11490:adaptin family protein | 1 | Chr06:6273644–6283819 (+) | 1.193e-11 | |
| Glyma.06G084800 | hypothetical protein | NA | 1 | Chr06:6515571–6517480 (-) | 3.489e-12 | |
| Glyma.06G085000 | hypothetical protein | NA | 1 | Chr06:6524339–6529016 (-) | 3.489e-12 | |
| Glyma.06G085100 | hypothetical protein | NA | 1 | Chr06:6531956–6537295 (-) | 3.489e-12 | |
| Glyma.06G085200 | hypothetical protein | NA | 1 | Chr06:6540849–6545557 (+) | 4.784e-12 | |
| Glyma.06G112300 | hypothetical protein | AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase | 1 | Chr06:9113982–9118848 (-) | 6.496e-13 | |
| Glyma.06G112600 | hypothetical protein | AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1 | Chr06:9134358–9144986 (+) | 6.496e-13 | |
| Glyma.06G112700 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr06:9156973–9158659 (+) | 6.496e-13 | |
| Glyma.06G118500 | hypothetical protein | NA | 1 | Chr06:9644661–9650144 (-) | 1.114e-12 | |
| Glyma.06G118800 | hypothetical protein | NA | 1 | Chr06:9666921–9667708 (+) | 1.114e-12 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 1.415e-16 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 1.415e-16 | |
| Glyma.06G126500 | hypothetical protein | AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr06:10367536–10373426 (-) | 3.896e-15 | |
| Glyma.06G126900 | hypothetical protein | AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) | 1 | Chr06:10403126–10408307 (-) | 4.877e-13 | |
| Glyma.06G130700 | hypothetical protein | AT5G53060:RCF3:RNA-binding KH domain-containing protein | 1 | Chr06:10742110–10747597 (-) | 6.602e-12 | |
| Glyma.06G130900 | hypothetical protein | AT4G27800:TAP38:thylakoid-associated phosphatase 38 | 1 | Chr06:10753446–10757827 (+) | 7.678e-13 | |
| Glyma.07G021100 | hypothetical protein | NA | 1 | Chr07:1647678–1650627 (+) | 7.024e-11 | |
| Glyma.07G021600 | hypothetical protein | AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase | 1 | Chr07:1673827–1680014 (-) | 7.024e-11 | |
| Glyma.07G021700 | hypothetical protein | NA | 1 | Chr07:1684537–1692320 (+) | 3.335e-11 | |
| Glyma.07G087700 | hypothetical protein | AT3G24495:MSH7:MUTS homolog 7 | 1 | Chr07:8111751–8121053 (+) | 7.055e-12 | |
| Glyma.08G122000 | hypothetical protein | AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr08:9397717–9410004 (+) | 1.572e-11 | |
| Glyma.09G016500 | hypothetical protein | NA | 1 | Chr09:1274652–1276853 (-) | 6.886e-13 | |
| Glyma.09G016800 | hypothetical protein | NA | 1 | Chr09:1300913–1311894 (+) | 2.192e-12 | |
| Glyma.09G080200 | hypothetical protein | NA | 1 | Chr09:9256042–9263239 (-) | 2.538e-11 | |
| Glyma.09G186700 | hypothetical protein | AT1G20050:HYD1:C-8,7 sterol isomerase | 1 | Chr09:41147591–41150204 (+) | 1.477e-14 | |
| Glyma.09G187600 | hypothetical protein | AT5G19460:NUDT20:nudix hydrolase homolog 20 | 1 | Chr09:41213588–41217191 (+) | 6.446e-11 | |
| Glyma.10G079700 | hypothetical protein | AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family | 1 | Chr10:9218478–9219468 (-) | 2.285e-12 | |
| Glyma.10G080600 | hypothetical protein | NA | 1 | Chr10:9501678–9504456 (+) | 3.898e-12 | |
| Glyma.10G080700 | hypothetical protein | NA | 1 | Chr10:9510013–9512097 (+) | 3.898e-12 | |
| Glyma.10G080900 | hypothetical protein | NA | 1 | Chr10:9552268–9552854 (+) | 3.898e-12 | |
| Glyma.10G081700 | hypothetical protein | NA | 1 | Chr10:9752508–9758422 (+) | 8.683e-12 | |
| Glyma.10G082100 | hypothetical protein | AT3G05680:EMB2016:embryo defective 2016 | 1 | Chr10:9934486–9960586 (-) | 9.078e-12 | |
| Glyma.11G127100 | hypothetical protein | AT1G06040:STO:B-box zinc finger family protein | 1 | Chr11:9656242–9659517 (+) | 3.147e-11 | |
| Glyma.11G127200 | hypothetical protein | AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein | 1 | Chr11:9660434–9665570 (-) | 3.147e-11 | |
| Glyma.11G127300 | hypothetical protein | AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein | 1 | Chr11:9667918–9671917 (-) | 3.147e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 3.711e-15 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 3.711e-15 | |
| Glyma.12G186200 | hypothetical protein | AT3G44350:NAC061:NAC domain containing protein 61 | 1 | Chr12:34708678–34710549 (+) | 2.836e-11 | |
| Glyma.12G198700 | hypothetical protein | AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein | 1 | Chr12:36001658–36004086 (+) | 9.451e-12 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 3.472e-19 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 1.201e-16 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 3.268e-16 | |
| Glyma.12G204600 | hypothetical protein | AT4G28310:AT4G28310:microtubule-associated protein | 1 | Chr12:36504234–36505245 (+) | 4.946e-15 | |
| Glyma.12G205900 | hypothetical protein | NA | 1 | Chr12:36622011–36625824 (+) | 6.124e-12 | |
| Glyma.12G228000 | hypothetical protein | AT1G53210:AT1G53210:sodium/calcium exchanger family protein / calcium-binding EF hand family protein | 1 | Chr12:38789187–38797498 (+) | 3.171e-11 | |
| Glyma.12G228300 | hypothetical protein | AT3G15030:TCP4:TCP family transcription factor 4 | 1 | Chr12:38813527–38816237 (-) | 1.734e-11 | |
| Glyma.13G095000 | hypothetical protein | NA | 1 | Chr13:21005327–21006774 (-) | 4.742e-11 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 1.055e-12 | |
| Glyma.13G134500 | hypothetical protein | AT3G09560:PAH1:Lipin family protein | 1 | Chr13:24696109–24705068 (-) | 5.557e-12 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 3.04e-14 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 3.04e-14 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 1.042e-13 | |
| Glyma.14G197700 | hypothetical protein | AT5G58470:TAF15b:TBP-associated factor 15B | 1 | Chr14:46291986–46298337 (+) | 6.093e-11 | |
| Glyma.14G198000 | hypothetical protein | NA | 1 | Chr14:46334117–46336863 (+) | 6.093e-11 | |
| Glyma.14G198100 | hypothetical protein | NA | 1 | Chr14:46337677–46340654 (+) | 1.45e-11 | |
| Glyma.14G201700 | hypothetical protein | NA | 1 | Chr14:46711634–46715644 (-) | 5.536e-13 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 8.576e-12 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 8.294e-12 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 8.575e-12 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 8.576e-12 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 1.156e-11 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 3.429e-13 | |
| Glyma.16G004200 | hypothetical protein | AT4G06676:AT4G06676:etoposide-induced protein | 1 | Chr16:226685–233101 (+) | 9.743e-12 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 4.223e-11 | |
| Glyma.16G121000 | IQD20 | AT3G51380:IQD20:IQ-domain 20 | 1 | Chr16:26909514–26910355 (+) | 8.535e-11 | |
| Glyma.16G139000 | hypothetical protein | NA | 1 | Chr16:29623540–29631451 (+) | 2.803e-11 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 6.298e-14 | |
| Glyma.16G140600 | hypothetical protein | NA | 1 | Chr16:29836830–29839178 (+) | 1.596e-11 | |
| Glyma.16G142300 | hypothetical protein | AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein | 1 | Chr16:30086178–30091466 (-) | 9.124e-11 | |
| Glyma.16G145100 | hypothetical protein | NA | 1 | Chr16:30578388–30581421 (-) | 4.952e-11 | |
| Glyma.16G145600 | hypothetical protein | AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… | 1 | Chr16:30652378–30659548 (+) | 4.952e-11 | |
| Glyma.16G179800 | hypothetical protein | AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein | 1 | Chr16:34022480–34027055 (-) | 3.448e-14 | |
| Glyma.16G189100 | hypothetical protein | AT1G05190:emb2394:Ribosomal protein L6 family | 1 | Chr16:35170253–35173950 (-) | 2.983e-13 | |
| Glyma.17G064000 | hypothetical protein | AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein | 1 | Chr17:4924830–4930155 (-) | 1.113e-12 | |
| Glyma.17G064200 | hypothetical protein | AT5G57500:AT5G57500:Galactosyltransferase family protein | 1 | Chr17:4943412–4944357 (-) | 1.113e-12 | |
| Glyma.17G137100 | hypothetical protein | AT4G22860:AT4G22860:Cell cycle regulated microtubule associated protein | 1 | Chr17:11065492–11072635 (+) | 2.791e-12 | |
| Glyma.18G201900 | hypothetical protein | NA | 1 | Chr18:48192545–48196624 (-) | 6.14e-11 | |
| Glyma.18G212700 | hypothetical protein | AT5G01820:SR1:serine/threonine protein kinase 1 | 1 | Chr18:49942123–49944169 (-) | 6.732e-11 | |
| Glyma.18G220200 | hypothetical protein | AT2G38650:GAUT7:galacturonosyltransferase 7 | 1 | Chr18:50714270–50723555 (-) | 5.215e-11 | |
| Glyma.18G220300 | hypothetical protein | NA | 1 | Chr18:50719690–50720509 (-) | 5.215e-11 | |
| Glyma.18G251000 | hypothetical protein | NA | 1 | Chr18:53738009–53740714 (+) | 9.748e-11 | |
| Glyma.18G251900 | hypothetical protein | AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… | 1 | Chr18:53855786–53862322 (-) | 1.945e-11 | |
| Glyma.18G259000 | hypothetical protein | NA | 1 | Chr18:54442402–54446789 (-) | 8.12e-11 | |
| Glyma.18G266100 | hypothetical protein | NA | 1 | Chr18:55052591–55056489 (-) | 6.329e-12 | |
| Glyma.18G266500 | hypothetical protein | NA | 1 | Chr18:55088284–55091427 (-) | 6.867e-12 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 2.278e-15 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 2.278e-15 | |
| Glyma.20G098400 | hypothetical protein | AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b | 1 | Chr20:34151918–34155417 (+) | 5.665e-12 | |
| Glyma.20G101700 | hypothetical protein | AT5G08580:AT5G08580:Calcium-binding EF hand family protein | 1 | Chr20:34467936–34475476 (-) | 6.516e-12 | |
| Glyma.20G106900 | hypothetical protein | NA | 1 | Chr20:34962043–34967985 (+) | 8.396e-13 | |
| Glyma.20G108700 | hypothetical protein | AT1G09290:AT1G09290:uncharacterized protein | 1 | Chr20:35109869–35115132 (-) | 1.866e-11 |