Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P09733

Metabolite ID
P09733
Deionized mass
458.2312 Da
Average m/z
459.2390
Average RT
10.2433
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
48
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

48 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)4.618e-12
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)1.839e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)1.839e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)1.839e-11
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)4.618e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.082e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)3.427e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.279e-16
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.712e-15
Glyma.06G131700 hypothetical protein NA 1Chr06:10850105–10855203 (+)1.799e-12
Glyma.06G132100 hypothetical protein NA 1Chr06:10873977–10879178 (-)1.799e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.419e-19
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.76e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)5.031e-14
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)1.072e-12
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)1.785e-13
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)3.544e-11
Glyma.09G272300 hypothetical protein AT5G01950:AT5G01950:Leucine-rich repeat protein kinase family protein 1Chr09:48873276–48883421 (-)7.333e-11
Glyma.09G272800 hypothetical protein AT3G08670:AT3G08670:serine/arginine repetitive matrix-like protein 1Chr09:48916725–48921396 (+)7.333e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)1.839e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)1.839e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)1.839e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)1.839e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)1.839e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)1.043e-12
Glyma.11G223200 hypothetical protein NA 1Chr11:31833899–31837181 (+)5.497e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)5.383e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.543e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.349e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.543e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.543e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.979e-13
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 1Chr15:48661607–48665946 (-)1.322e-11
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)6.396e-12
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)6.396e-12
Glyma.16G018000 hypothetical protein NA 1Chr16:1601748–1607341 (-)5.599e-12
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)8.265e-12
Glyma.17G144000 hypothetical protein AT4G16760:ACX1:acyl-CoA oxidase 1 1Chr17:11759547–11765498 (-)3.691e-12
Glyma.17G145900 hypothetical protein AT4G16820:PLA-I{beta]2:alpha/beta-Hydrolases superfamily protein 1Chr17:12027849–12029726 (+)9.326e-12
Glyma.17G146500 hypothetical protein AT5G47120:BI1:BAX inhibitor 1 1Chr17:12069988–12072568 (+)9.235e-12
Glyma.17G146700 hypothetical protein NA 1Chr17:12106586–12116978 (+)1.021e-12
Glyma.17G147100 hypothetical protein AT3G04920:AT3G04920:Ribosomal protein S24e family protein 1Chr17:12129715–12133104 (+)1.14e-12
Glyma.17G147300 hypothetical protein NA 1Chr17:12137274–12139494 (-)9.235e-12
Glyma.17G147500 hypothetical protein NA 1Chr17:12150627–12153374 (-)1.021e-12
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)5.561e-12
Glyma.18G108400 hypothetical protein NA 1Chr18:12370997–12390275 (-)3.076e-11
Glyma.18G238000 hypothetical protein AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein 1Chr18:52679724–52682816 (+)8.282e-11
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)2.086e-12