Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P08719

Metabolite ID
P08719
Deionized mass
289.1527 Da
Average m/z
290.1595
Average RT
9.8995
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G064500 hypothetical protein NA 2Chr04:5367346–5372857 (+)4.14e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.726e-15
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)7.52e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.383e-16
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)3.777e-11
Glyma.04G064300 Tyrosyl-DNA phosphodiesterase 1 AT5G15170:TDP1:tyrosyl-DNA phosphodiesterase-like protein 1Chr04:5351566–5357225 (+)8.028e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)1.484e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)2.268e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.853e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.634e-12
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)2.673e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)6.591e-12
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)2.565e-12
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)2.565e-12
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)2.565e-12
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)5.148e-12
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)3.416e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)4.088e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)4.227e-11
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1Chr07:6173172–6180430 (-)9.558e-11
Glyma.07G068600 hypothetical protein NA 1Chr07:6192764–6197166 (+)9.558e-11
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)4.679e-11
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)4.679e-11
Glyma.07G069100 hypothetical protein NA 1Chr07:6246145–6250192 (+)9.558e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.631e-11
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)3.472e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)9.733e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)2.48e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)2.48e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)1.018e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)1.018e-11
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)5.34e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)3.741e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)5.546e-13
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)7.295e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)7.295e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.84e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.84e-11
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)6.552e-11
Glyma.18G098900 hypothetical protein NA 1Chr18:10297476–10305043 (+)2.965e-11
Glyma.18G099000 hypothetical protein AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein 1Chr18:10326925–10347143 (-)2.965e-11
Glyma.18G100300 hypothetical protein NA 1Chr18:10523838–10534676 (+)1.986e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.099e-16
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.099e-16
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)2.91e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.855e-12
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)2.11e-11