Overview Annotation GWAS Evidence Associated genes

P08598

Metabolite ID
P08598
Deionized mass
487.1582 Da
Average m/z
488.1678
Average RT
9.8525
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)4.589e-14
Glyma.06G203300 hypothetical protein AT1G18640:PSP:3-phosphoserine phosphatase 1Chr06:19025714–19030363 (+)2.934e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.877e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)3.41e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.901e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.043e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.494e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.494e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.494e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.494e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)5.046e-12
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)4.055e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)3.791e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)5.078e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)5.078e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)2.954e-12