Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P08505

Metabolite ID
P08505
Deionized mass
330.0930 Da
Average m/z
331.1000
Average RT
9.8222
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
90
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

90 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)5.601e-13
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)5.195e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)5.549e-12
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)4.376e-13
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 2Chr06:50401945–50408153 (+)7.535e-15
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 2Chr06:50586679–50589765 (+)1.177e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)2.464e-14
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.351e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.352e-12
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 2Chr20:34151918–34155417 (+)5.352e-14
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)2.037e-11
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)4.903e-12
Glyma.01G099100 hypothetical protein NA 1Chr01:33017228–33023840 (+)3.805e-11
Glyma.01G099600 hypothetical protein AT3G53930:AT3G53930:Protein kinase superfamily protein__AT2G37840:AT2G37840:Protein kinase superfamily protein 1Chr01:33115843–33125726 (-)3.805e-11
Glyma.01G099900 hypothetical protein NA 1Chr01:33275414–33282430 (+)3.805e-11
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)2.292e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.797e-15
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)4.712e-13
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.391e-14
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)1.466e-13
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)7.308e-13
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)7.308e-13
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)7.308e-13
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)7.308e-13
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)7.308e-13
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)7.308e-13
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)7.308e-13
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)5.195e-12
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)8.787e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.116e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)7.99e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.136e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)3.015e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)3.561e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)3.561e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.415e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.303e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.303e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.303e-12
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)4.169e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.068e-12
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)2.824e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)1.02e-11
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)1.163e-14
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)4.911e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)4.911e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)2.153e-11
Glyma.07G202300 IFS1 isoflavone synthase 1 NA 1Chr07:37166660–37169027 (+)1.739e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)1.242e-13
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)2.708e-13
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)2.268e-11
Glyma.09G068800 hypothetical protein AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein 1Chr09:6979166–6993110 (-)5.022e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.811e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.111e-12
Glyma.10G233200 hypothetical protein NA 1Chr10:46244187–46249491 (-)3.3e-11
Glyma.10G233700 hypothetical protein AT3G49050:AT3G49050:alpha/beta-Hydrolases superfamily protein 1Chr10:46285252–46289700 (-)3.3e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.521e-13
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)2.119e-13
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)2.119e-13
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)2.119e-13
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)2.119e-13
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)7.224e-15
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.231e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.231e-12
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)2.809e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.465e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.465e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.351e-12
Glyma.13G149700 hypothetical protein AT3G10040:AT3G10040:sequence-specific DNA binding transcription factor 1Chr13:26321941–26324172 (+)7.571e-11
Glyma.15G106000 hypothetical protein AT4G21760:BGLU47:beta-glucosidase 47 1Chr15:8307131–8316135 (+)3.944e-11
Glyma.15G108100 hypothetical protein NA 1Chr15:8500878–8505582 (-)6.079e-11
Glyma.15G109500 hypothetical protein AT4G22030:AT4G22030:F-box protein with a domain protein 1Chr15:8591856–8593774 (-)3.303e-11
Glyma.15G110200 hypothetical protein NA 1Chr15:8634006–8639001 (-)1.775e-11
Glyma.15G111000 hypothetical protein AT1G62305:AT1G62305:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein__AT1G11940:AT1G11940:Cor… 1Chr15:8692505–8697919 (-)4.734e-11
Glyma.15G111200 hypothetical protein AT1G11950:AT1G11950:Transcription factor jumonji (jmjC) domain-containing protein 1Chr15:8705907–8710609 (-)4.777e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.668e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.719e-12
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)2.009e-11
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)2.009e-11
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)1.045e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)9.836e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)3.476e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)3.476e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1134716–1143232 (+)5.254e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.584e-16
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.584e-16
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)3.446e-11
Glyma.20G098500 hypothetical protein AT2G39470:PnsL1:PsbP-like protein 2 1Chr20:34179794–34183432 (-)4.623e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)4.866e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)3.597e-11