Overview Annotation GWAS Evidence Associated genes

P08385

Metabolite ID
P08385
Deionized mass
502.1713 Da
Average m/z
503.1770
Average RT
9.7776
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
135
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

135 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G224800 hypothetical protein NA 4Chr13:33748627–33756494 (-)1.376e-11
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.428e-12
Glyma.19G037200 hypothetical protein AT5G15680:AT5G15680:ARM repeat superfamily protein 3Chr19:5178930–5212367 (+)1.591e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 2Chr03:2007617–2009871 (+)1.335e-14
Glyma.03G020800 hypothetical protein AT3G61050:NTMC2T4:Calcium-dependent lipid-binding (CaLB domain) family protein 2Chr03:2124895–2135692 (-)3.719e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)1.816e-15
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 2Chr05:32421116–32425198 (-)1.57e-14
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.267e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.267e-13
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 2Chr14:5675792–5680343 (+)2.288e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)1.08e-11
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)1.519e-11
Glyma.18G106600 hypothetical protein NA 2Chr18:11947553–11951868 (+)1.932e-13
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)6.559e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)3.428e-12
Glyma.20G120200 hypothetical protein NA 2Chr20:36268998–36282456 (-)2.526e-12
Glyma.01G021000 hypothetical protein NA 1Chr01:2122589–2125447 (+)4.312e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)3.572e-11
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)6.534e-12
Glyma.02G151500 hypothetical protein AT2G47990:SWA1:transducin family protein / WD-40 repeat family protein 1Chr02:15586732–15588774 (+)2.304e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)4.993e-11
Glyma.03G039900 hypothetical protein NA 1Chr03:4988423–4991582 (-)7.913e-12
Glyma.03G041900 hypothetical protein NA 1Chr03:5313339–5315847 (-)8.038e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)6.245e-13
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)6.121e-16
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)3.986e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)2.775e-12
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)6.766e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.174e-17
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)5.981e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)3.88e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)4.394e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)4.394e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)8.864e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.12e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.12e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.12e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)7.42e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.946e-16
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.346e-21
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)7.393e-18
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)1.541e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)7.134e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)1.229e-13
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)1.229e-13
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)1.229e-13
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)1.636e-15
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.554e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.554e-13
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.773e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.859e-13
Glyma.06G136200 hypothetical protein AT5G54170:AT5G54170:Polyketide cyclase/dehydrase and lipid transport superfamily protein 1Chr06:11160066–11162505 (-)9.87e-11
Glyma.07G035100 hypothetical protein NA 1Chr07:2810396–2815857 (+)5.995e-11
Glyma.07G035600 hypothetical protein AT1G67120:AT1G67120:midasin-like protein 1Chr07:2836189–2887535 (+)5.995e-11
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)4.755e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)2.384e-11
Glyma.07G078900 hypothetical protein AT3G61080:AT3G61080:Protein kinase superfamily protein 1Chr07:7187362–7192149 (+)3.306e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.186e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)3.907e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)5.507e-12
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)9.985e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)8.056e-11
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)1e-10
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)7.079e-12
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)8.911e-11
Glyma.11G237000 hypothetical protein AT5G10050:AT5G10050:NAD(P)-binding Rossmann-fold superfamily protein 1Chr11:33169449–33171449 (+)3.976e-11
Glyma.11G238100 hypothetical protein AT4G39820:AT4G39820:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr11:33261569–33264662 (+)8.745e-11
Glyma.12G096000 hypothetical protein AT1G08465:YAB2:Plant-specific transcription factor YABBY family protein 1Chr12:8080306–8088711 (-)1.257e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.462e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.462e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)8.521e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)8.521e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)4.066e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)6.831e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)6.072e-11
Glyma.12G228000 hypothetical protein AT1G53210:AT1G53210:sodium/calcium exchanger family protein / calcium-binding EF hand family protein 1Chr12:38789187–38797498 (+)2.97e-13
Glyma.12G228300 hypothetical protein AT3G15030:TCP4:TCP family transcription factor 4 1Chr12:38813527–38816237 (-)2.217e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.267e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.267e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.618e-13
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)5.569e-15
Glyma.13G156200 hypothetical protein AT1G80710:DRS1:DROUGHT SENSITIVE 1 1Chr13:27115515–27118951 (+)9.887e-11
Glyma.13G224300 hypothetical protein NA 1Chr13:33703380–33715996 (-)8.46e-11
Glyma.13G224500 hypothetical protein AT1G29750:RKF1:receptor-like kinase in flowers 1 1Chr13:33725180–33735368 (+)1.376e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)9.049e-12
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)2.536e-12
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)9.024e-14
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.069e-25
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.702e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)1.589e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.34e-15
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)5.26e-15
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.34e-15
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.34e-15
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)4.088e-11
Glyma.16G114900 hypothetical protein NA 1Chr16:25456379–25485759 (+)9.227e-11
Glyma.16G115800 hypothetical protein NA 1Chr16:25719040–25728740 (-)2.775e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)9.556e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)5.474e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.68e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)1.005e-16
Glyma.16G121400 hypothetical protein NA 1Chr16:26989007–26992349 (+)5.371e-12
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.005e-12
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)4.157e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.165e-13
Glyma.16G140000 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 1Chr16:29738375–29739010 (+)4.383e-11
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)2.633e-13
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.762e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)6e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)3.653e-12
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)8.909e-14
Glyma.16G198600 hypothetical protein AT5G52060:BAG1:BCL-2-associated athano 1 1Chr16:35958085–35960833 (+)1.698e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)7.786e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)7.786e-12
Glyma.17G144400 hypothetical protein NA 1Chr17:11801158–11803913 (+)2.493e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)7.663e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)6.412e-13
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)1.08e-11
Glyma.18G106700 hypothetical protein NA 1Chr18:11956201–11957138 (-)4.347e-11
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 1Chr18:11959920–11966545 (-)4.347e-11
Glyma.18G107800 hypothetical protein AT1G06500:AT1G06500:uncharacterized protein 1Chr18:12208710–12212011 (-)3.353e-12
Glyma.18G107900 hypothetical protein AT1G06490:CalS7:glucan synthase-like 7 1Chr18:12220182–12260477 (+)3.353e-12
Glyma.18G108000 hypothetical protein NA 1Chr18:12221736–12225257 (-)3.353e-12
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)5.09e-12
Glyma.18G242900 hypothetical protein NA 1Chr18:53113341–53119592 (-)2.76e-11
Glyma.18G274100 hypothetical protein AT5G38880:AUG5:HAUS augmin-like complex subunit 1Chr18:55672621–55681964 (+)6.083e-12
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)7.101e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)1.042e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)5.307e-11
Glyma.19G037400 hypothetical protein AT5G38820:AT5G38820:Transmembrane amino acid transporter family protein 1Chr19:5224298–5228610 (-)1.591e-11
Glyma.19G038000 hypothetical protein AT3G02350:GAUT9:galacturonosyltransferase 9 1Chr19:5321094–5324327 (+)1.591e-11
Glyma.19G038300 hypothetical protein NA 1Chr19:5381177–5383149 (+)1.591e-11
Glyma.19G038400 hypothetical protein AT3G02360:AT3G02360:6-phosphogluconate dehydrogenase family protein 1Chr19:5386122–5388865 (+)1.591e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)1.267e-11
Glyma.20G223300 hypothetical protein AT1G09770:CDC5:cell division cycle 5 1Chr20:45791239–45803369 (-)2.728e-13