Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P08026

Metabolite ID
P08026
Deionized mass
597.2163 Da
Average m/z
598.2221
Average RT
9.6519
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)6.114e-14
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 3Chr16:35831912–35835153 (+)2.211e-12
Glyma.16G106200 hypothetical protein NA 2Chr16:21463300–21469532 (+)1.559e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 2Chr16:21495147–21497932 (+)2.668e-12
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)1.254e-11
Glyma.02G107400 hypothetical protein NA 1Chr02:10245905–10246706 (-)4.096e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.26e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)4.029e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)9.442e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.407e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.213e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.281e-16
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)6.341e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)6.341e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)4.791e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)1.881e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)2.245e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)1.881e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)1.881e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)2.245e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.284e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)5.01e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)9.847e-11
Glyma.08G117700 hypothetical protein NA 1Chr08:9080318–9084658 (-)6.163e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.013e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.013e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.013e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.013e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.908e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)7.906e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)7.906e-12
Glyma.12G212300 hypothetical protein AT3G58710:WRKY69:WRKY DNA-binding protein 69 1Chr12:37131153–37134096 (+)6.657e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.69e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)7.894e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.69e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.69e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)8.285e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.675e-13
Glyma.16G055000 hypothetical protein NA 1Chr16:5411241–5413143 (-)5.836e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)3.108e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)6.114e-14
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)2.577e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.147e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.514e-15
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)9.933e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)8.393e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)4.811e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.336e-12
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)1.019e-11