Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P07947

Metabolite ID
P07947
Deionized mass
214.1297 Da
Average m/z
215.1368
Average RT
9.6324
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
121
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

121 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 5Chr16:36856833–36863994 (-)2.23e-13
Glyma.16G210200 hypothetical protein NA 5Chr16:36933402–36938940 (+)4.847e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)2.355e-12
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)4.323e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)3e-13
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)3.048e-11
Glyma.16G196900 hypothetical protein NA 3Chr16:35841279–35846894 (-)4.031e-12
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)1.758e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)3.698e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)9.492e-17
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2Chr12:36289704–36295084 (-)5.868e-19
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)3.195e-17
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)8.066e-16
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.419e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.419e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.371e-15
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)8.758e-13
Glyma.01G039700 hypothetical protein AT1G10385:AT1G10385:Vps51/Vps67 family (components of vesicular transport) protein 1Chr01:4304713–4310259 (-)5.11e-11
Glyma.01G153300 hypothetical protein AT5G45340:CYP707A3:cytochrome P450, family 707, subfamily A, polypeptide 3__AT4G19230:CYP707A1:cytochrome P450, family … 1Chr01:49049375–49052359 (-)3.63e-11
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)8.878e-11
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)8.878e-11
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)8.878e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)5.446e-12
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)4.97e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)1.39e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.449e-13
Glyma.03G135300 hypothetical protein NA 1Chr03:35092248–35097578 (+)2.82e-11
Glyma.03G136100 hypothetical protein NA 1Chr03:35199503–35203392 (-)1.456e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.539e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)2.492e-12
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)4.621e-12
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)8.425e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)2.204e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.427e-14
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.329e-13
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)2.831e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.217e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.223e-11
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)7.98e-15
Glyma.06G085900 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr06:6617102–6622706 (-)2.222e-13
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)2.457e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)2.457e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)2.457e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)5.209e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)5.209e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)1.084e-12
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)1.015e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)1.084e-12
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)1.084e-12
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)1.015e-12
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)2.875e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.096e-14
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)2.424e-11
Glyma.07G019900 hypothetical protein AT1G79870:AT1G79870:D-isomer specific 2-hydroxyacid dehydrogenase family protein 1Chr07:1561952–1564494 (+)1.13e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)3.24e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)3.24e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)1.544e-11
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)4.387e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.681e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.186e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.098e-11
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)3.512e-13
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)4.316e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.535e-16
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.535e-16
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.782e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.782e-13
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)9.772e-11
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr12:36001658–36004086 (+)6.465e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)9.492e-17
Glyma.12G202500 hypothetical protein AT1G03600:PSB27:photosystem II family protein 1Chr12:36301835–36304669 (+)2.82e-11
Glyma.12G203300 hypothetical protein AT4G03430:EMB2770:pre-mRNA splicing factor-like protein 1Chr12:36371465–36377700 (-)2.112e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.547e-19
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)8.066e-16
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)3.055e-13
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)2.451e-14
Glyma.12G212800 hypothetical protein NA 1Chr12:37179924–37185798 (-)4.032e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)2.145e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)2.036e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)2.355e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.419e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.419e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.835e-12
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)7.061e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)9.296e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)8.446e-13
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)8.758e-13
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)1.735e-11
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)8.404e-11
Glyma.16G041700 hypothetical protein AT1G64770:PnsB2:NDH-dependent cyclic electron flow 1 1Chr16:3909907–3912569 (+)2.852e-12
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)3.468e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)4.323e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)4.323e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)4.323e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)4.323e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)6.883e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)2.695e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.281e-13
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)3.048e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)3.048e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)2.696e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.479e-14
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)3.514e-12
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)7.684e-13
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)3.8e-13
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)1.071e-12
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)4.556e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)8.335e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.624e-13
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.624e-13
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)2.672e-12
Glyma.18G055400 hypothetical protein NA 1Chr18:4824726–4828902 (+)2.629e-11
Glyma.18G057500 hypothetical protein AT2G30170:PBCP:Protein phosphatase 2C family protein 1Chr18:5080060–5083756 (-)5.999e-11
Glyma.18G057600 hypothetical protein AT1G07020:AT1G07020:uncharacterized protein 1Chr18:5084210–5084791 (+)5.999e-11
Glyma.18G057900 hypothetical protein NA 1Chr18:5092695–5097651 (-)5.999e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)1.491e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)7.548e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)7.548e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)5.28e-12
Glyma.19G195600 hypothetical protein AT3G52570:AT3G52570:alpha/beta-Hydrolases superfamily protein 1Chr19:45273343–45277374 (-)1.723e-11
Glyma.20G106800 hypothetical protein AT4G38520:AT4G38520:Protein phosphatase 2C family protein__AT3G51370:AT3G51370:Protein phosphatase 2C family protein 1Chr20:34935548–34940516 (-)1.095e-11