Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P07742

Metabolite ID
P07742
Deionized mass
145.0848 Da
Average m/z
146.0924
Average RT
9.5421
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
41
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

41 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 6Chr03:2202325–2234931 (+)5.912e-12
Glyma.03G021000 hypothetical protein NA 4Chr03:2148298–2162954 (-)7.691e-12
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 2Chr03:2240686–2246512 (-)2.673e-12
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 2Chr08:9198213–9201688 (-)2.342e-15
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 2Chr10:48805999–48811533 (-)4.861e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)4.788e-11
Glyma.03G021100 hypothetical protein AT1G12650:AT1G12650:rRNA biosis RRP36-like protein 1Chr03:2162406–2167712 (+)1.228e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)5.251e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.784e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.784e-13
Glyma.06G126400 hypothetical protein AT5G53150:AT5G53150:DnaJ heat shock amino-terminal domain protein 1Chr06:10356650–10362151 (-)3.755e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)7.241e-15
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.916e-13
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)4.92e-11
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)4.92e-11
Glyma.07G078300 hypothetical protein NA 1Chr07:7150800–7154478 (-)5.593e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)1.1e-12
Glyma.07G093700 hypothetical protein AT3G18290:BTS:zinc finger protein-like protein 1Chr07:8723740–8734056 (-)8.974e-12
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)7.229e-11
Glyma.08G107800 AK-HSDH aspartokinase-homoserine dehydrogenase AT4G19710:AK-HSDH II:aspartate kinase-homoserine dehydrogenase ii 1Chr08:8296196–8307328 (-)7.206e-11
Glyma.08G108400 hypothetical protein NA 1Chr08:8326311–8330206 (+)7.206e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)8.886e-11
Glyma.08G117100 hypothetical protein AT2G34190:AT2G34190:Xanthine/uracil permease family protein 1Chr08:9032236–9036159 (+)6.267e-11
Glyma.08G137600 hypothetical protein AT4G39780:AT4G39780:Integrase-type DNA-binding superfamily protein 1Chr08:10551821–10553620 (-)1.246e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.009e-11
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)8.683e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)5.385e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)5.385e-11
Glyma.10G264300 Mediator of RNA polymerase II transcription subunit 21 AT4G04780:MED21:mediator 21 1Chr10:48858818–48862498 (-)2.97e-11
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)2.051e-14
Glyma.10G266400 hypothetical protein NA 1Chr10:48984735–48993690 (+)1.837e-13
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)4.788e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)9.338e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)7.906e-12
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)3.56e-11
Glyma.16G041700 hypothetical protein AT1G64770:PnsB2:NDH-dependent cyclic electron flow 1 1Chr16:3909907–3912569 (+)7.684e-11
Glyma.16G041800 hypothetical protein NA 1Chr16:3914214–3917387 (-)7.764e-11
Glyma.16G042100 hypothetical protein NA 1Chr16:3931670–3933390 (-)8.983e-11
Glyma.16G042200 hypothetical protein AT2G23840:AT2G23840:HNH endonuclease 1Chr16:3933842–3940818 (+)8.984e-11
Glyma.17G038400 hypothetical protein AT3G17330:ECT6:evolutionarily conserved C-terminal region 6 1Chr17:2836787–2841979 (-)7.68e-11
Glyma.17G038500 hypothetical protein NA 1Chr17:2843533–2853547 (-)7.68e-11