Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P07390

Metabolite ID
P07390
Deionized mass
277.0981 Da
Average m/z
278.1043
Average RT
9.3960
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G303400 hypothetical protein NA 2Chr08:42139097–42147365 (+)8.312e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.962e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.962e-11
Glyma.16G111800 hypothetical protein AT2G17520:IRE1A:Endoribonuclease/protein kinase IRE1-like protein 2Chr16:24720965–24731678 (-)5.988e-12
Glyma.16G147400 hypothetical protein NA 2Chr16:30817535–30821568 (+)1.377e-12
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)6.902e-11
Glyma.03G171500 hypothetical protein AT3G53720:CHX20:cation/H+ exchanger 20 1Chr03:38601039–38606103 (+)7.666e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.78e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.662e-15
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)2.447e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)2.609e-11
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)2.698e-11
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)5.216e-11
Glyma.08G109000 SUB1 NA 1Chr08:8364770–8373803 (-)9.595e-13
Glyma.08G109400 CHS1 AT5G13930:TT4:Chalcone and stilbene synthase family protein 1Chr08:8391364–8394840 (+)3.207e-12
Glyma.08G110000 hypothetical protein AT3G23840:AT3G23840:HXXXD-type acyl-transferase family protein 1Chr08:8438346–8442806 (-)9.595e-13
Glyma.08G111700 hypothetical protein NA 1Chr08:8604527–8606424 (-)7.333e-11
Glyma.08G303300 hypothetical protein NA 1Chr08:42134782–42139026 (+)2.214e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.942e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.942e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.962e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)7.267e-13
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.169e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)5.169e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.169e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.169e-12
Glyma.15G172900 hypothetical protein AT5G57070:AT5G57070:hydroxyproline-rich glycoprotein family protein 1Chr15:15847563–15849835 (+)1.653e-11
Glyma.16G105700 hypothetical protein NA 1Chr16:21404554–21412265 (-)7.822e-16
Glyma.16G105800 hypothetical protein NA 1Chr16:21409016–21412087 (-)7.822e-16
Glyma.16G106200 hypothetical protein NA 1Chr16:21463300–21469532 (+)7.822e-16
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)3.766e-11
Glyma.16G111200 hypothetical protein AT5G65930:ZWI:kinesin-like calmodulin-binding protein (ZWICHEL) 1Chr16:24455709–24466236 (+)3.766e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)2.729e-12
Glyma.16G140000 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 1Chr16:29738375–29739010 (+)6.543e-12
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)1.64e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)8.31e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)6.141e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)6.141e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)4.665e-13
Glyma.16G147500 hypothetical protein NA 1Chr16:30832490–30834904 (+)1.377e-12
Glyma.16G147900 hypothetical protein NA 1Chr16:30864919–30872425 (+)1.421e-11
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)7.525e-11
Glyma.18G230900 hypothetical protein AT3G46210:AT3G46210:Ribosomal protein S5 domain 2-like superfamily protein 1Chr18:51956623–51961267 (+)9.971e-11