Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P07023

Metabolite ID
P07023
Deionized mass
138.0315 Da
Average m/z
139.0382
Average RT
9.2650
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)3.123e-14
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)1.262e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.04e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)6.065e-12
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)8.773e-11
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)5.894e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.04e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.04e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.616e-16
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.053e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)8.267e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)8.267e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)7.924e-12
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)5.033e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.04e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.04e-11
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)1.262e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.04e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)8.823e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.895e-13
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.895e-13
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.895e-13
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.895e-13
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.897e-13
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)6.104e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)6.104e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)6.104e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)4.145e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)4.145e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.919e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)4.026e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)6.065e-12
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)1.169e-12
Glyma.14G202400 hypothetical protein AT1G21480:AT1G21480:Exostosin family protein 1Chr14:46768802–46772377 (+)2.424e-11
Glyma.14G202500 hypothetical protein NA 1Chr14:46773824–46775761 (+)2.424e-11
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)5.64e-12
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)4.216e-12
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)8.773e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)6.579e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)5.218e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.111e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)5.894e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)3.823e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)7.423e-11