Overview Annotation GWAS Evidence Associated genes

P06838

Metabolite ID
P06838
Deionized mass
144.0405 Da
Average m/z
145.0482
Average RT
9.1945
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
22
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

22 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 2Chr03:1683395–1688893 (-)2.053e-14
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)3.67e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)5.754e-15
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)1.679e-11
Glyma.03G017800 hypothetical protein AT4G00770:TRM9:DUF4378 domain protein 1Chr03:1780719–1783735 (+)4.264e-13
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)8.417e-13
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)5.174e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)5.438e-11
Glyma.03G036800 TBP1 AT3G13445:TBP1:TATA binding protein 1 1Chr03:4472672–4477787 (-)6.805e-12
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)8.486e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.409e-11
Glyma.06G317900 hypothetical protein AT5G51400:AT5G51400:PLAC8 family protein 1Chr06:50645095–50649256 (+)1.423e-15
Glyma.08G039600 hypothetical protein NA 1Chr08:3107698–3116601 (-)2.712e-12
Glyma.08G107800 AK-HSDH aspartokinase-homoserine dehydrogenase AT4G19710:AK-HSDH II:aspartate kinase-homoserine dehydrogenase ii 1Chr08:8296196–8307328 (-)6.62e-11
Glyma.08G108400 hypothetical protein NA 1Chr08:8326311–8330206 (+)6.62e-11
Glyma.10G261100 hypothetical protein NA 1Chr10:48628245–48635184 (+)3.25e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.126e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)5.754e-15
Glyma.14G150300 hypothetical protein AT4G08330:AT4G08330:uncharacterized protein 1Chr14:32471354–32474446 (-)3.947e-13
Glyma.16G038900 hypothetical protein AT3G03790:AT3G03790:ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein 1Chr16:3666547–3676052 (+)6.184e-11
Glyma.16G039800 hypothetical protein NA 1Chr16:3730538–3733668 (-)3.903e-12
Glyma.18G091600 hypothetical protein NA 1Chr18:9165090–9166656 (-)2.307e-11