Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P06758

Metabolite ID
P06758
Deionized mass
303.1640 Da
Average m/z
304.1722
Average RT
9.1631
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
65
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

65 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)6.809e-13
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 3Chr17:36319785–36329259 (-)3.363e-13
Glyma.17G217900 hypothetical protein NA 3Chr17:36771760–36778616 (-)7.805e-12
Glyma.08G303300 hypothetical protein NA 2Chr08:42134782–42139026 (+)1.845e-17
Glyma.16G137600 hypothetical protein NA 2Chr16:29468438–29472890 (-)4.103e-11
Glyma.16G140600 hypothetical protein NA 2Chr16:29836830–29839178 (+)3.152e-11
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)8.302e-13
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 2Chr16:35831912–35835153 (+)2.437e-11
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)3.363e-13
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)3.222e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)5.845e-12
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)1.931e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)2.271e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.065e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.333e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)6.964e-13
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)1.407e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)2.404e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)1.407e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)1.407e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)2.404e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)1.709e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)2.642e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)4.607e-12
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)4.607e-12
Glyma.08G100500 hypothetical protein NA 1Chr08:7719123–7720974 (+)2.697e-11
Glyma.08G100600 hypothetical protein NA 1Chr08:7722727–7725325 (-)2.697e-11
Glyma.08G101200 hypothetical protein AT3G26000:AT3G26000:Ribonuclease inhibitor 1Chr08:7777648–7781453 (+)7.206e-11
Glyma.08G101500 hypothetical protein NA 1Chr08:7801199–7808033 (+)2.579e-11
Glyma.08G102900 Lipoxygenase AT1G67560:LOX6:PLAT/LH2 domain-containing lipoxygenase family protein 1Chr08:7886865–7892029 (-)1.288e-11
Glyma.08G117700 hypothetical protein NA 1Chr08:9080318–9084658 (-)3.588e-11
Glyma.08G303400 hypothetical protein NA 1Chr08:42139097–42147365 (+)1.845e-17
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)2.613e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)7.868e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)7.868e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)7.868e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)7.868e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.191e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.808e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.922e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.922e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)6.737e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.101e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)6.737e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)6.737e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.691e-12
Glyma.16G001800 hypothetical protein NA 1Chr16:100663–102059 (-)5.735e-12
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)3.019e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)6.809e-13
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)5.329e-11
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)2.001e-11
Glyma.16G137000 hypothetical protein NA 1Chr16:29418205–29421765 (-)3.294e-11
Glyma.16G137100 hypothetical protein NA 1Chr16:29421091–29421534 (+)3.294e-11
Glyma.16G141300 hypothetical protein AT4G36710:HAM4:GRAS family transcription factor 1Chr16:29937044–29939337 (+)3.028e-11
Glyma.16G141600 hypothetical protein AT5G66710:AT5G66710:Protein kinase superfamily protein__AT3G50720:AT3G50720:Protein kinase superfamily protein 1Chr16:29970884–29978773 (-)3.028e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)1.795e-13
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)6.533e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)6.533e-12
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)8.302e-13
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)2.554e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)4.478e-13
Glyma.17G212200 hypothetical protein NA 1Chr17:35064075–35065120 (-)8.657e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)7.405e-12
Glyma.17G218400 hypothetical protein NA 1Chr17:36900654–36906204 (+)3.795e-11
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)8.832e-11