Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P06694

Metabolite ID
P06694
Deionized mass
329.6590 Da
Average m/z
330.6654
Average RT
9.1414
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
103
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

103 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)6.022e-13
Glyma.17G217900 hypothetical protein NA 3Chr17:36771760–36778616 (-)4.16e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 2Chr03:169480–172727 (+)9.457e-11
Glyma.04G064500 hypothetical protein NA 2Chr04:5367346–5372857 (+)2.513e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)6.213e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)1.098e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)5.458e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)5.458e-14
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)4.838e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)5.669e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)1.939e-12
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)1.105e-12
Glyma.01G021600 hypothetical protein AT5G65540:AT5G65540:transcription initiation factor TFIID subunit 1Chr01:2189923–2194362 (-)3.37e-11
Glyma.01G022300 hypothetical protein NA 1Chr01:2215383–2217438 (+)2.194e-11
Glyma.01G034300 hypothetical protein NA 1Chr01:3573149–3579461 (-)4.475e-11
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)9.028e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.647e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.647e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)8.671e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)1.688e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.82e-18
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)8.025e-13
Glyma.04G044600 hypothetical protein NA 1Chr04:3556928–3559705 (-)6.112e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)5.94e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.843e-12
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)8.757e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)8.317e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)8.892e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)8.892e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)8.892e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.956e-16
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.461e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)6.83e-14
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.59e-16
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.59e-16
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)2.489e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)1.553e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)2.489e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)2.489e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)1.553e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)8.426e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)5.079e-12
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)2.118e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.943e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)7.241e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)9.829e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)5.309e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)6.903e-13
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)6.903e-13
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)2.153e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)6.902e-13
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)6.902e-13
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)7.4e-13
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)2.507e-11
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)2.508e-11
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)2.508e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)3.331e-13
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)7.4e-13
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.761e-12
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)8.277e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)1.19e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)1.19e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)1.19e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)9.275e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)9.275e-13
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.755e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.755e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)6.881e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)9.114e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)9.114e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.098e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.7e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.7e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.458e-14
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)7.495e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)5.669e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.736e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)6.908e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.736e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.736e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)7.833e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)9.349e-15
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)2.894e-12
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)6.022e-13
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)6.137e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)9.379e-13
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.088e-12
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)3.329e-15
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)7.128e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)2.208e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)6.34e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)6.34e-12
Glyma.17G213000 hypothetical protein NA 1Chr17:35353582–35358772 (+)9.266e-11
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)7.762e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.989e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)1.939e-12
Glyma.17G218400 hypothetical protein NA 1Chr17:36900654–36906204 (+)3.915e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)1.688e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.346e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.346e-11
Glyma.20G105100 hypothetical protein NA 1Chr20:34737596–34737811 (-)7.221e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)1.531e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)2.38e-11