Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P06585

Metabolite ID
P06585
Deionized mass
441.2228 Da
Average m/z
442.2317
Average RT
9.1011
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
61
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

61 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 5Chr16:36856833–36863994 (-)1.389e-13
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)4.838e-12
Glyma.10G272800 hypothetical protein AT1G25350:OVA9:glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS 2Chr10:49530856–49539222 (+)2.519e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.037e-11
Glyma.16G172500 hypothetical protein AT3G59140:ABCC10:multidrug resistance-associated protein 14 2Chr16:33322352–33330062 (+)2.845e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)9.324e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)4.304e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.096e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)3.128e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)8.327e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.374e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.178e-12
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)6.764e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)3.003e-13
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)4.088e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.858e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.858e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.858e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.858e-11
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)8.047e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.11e-11
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)8.047e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.716e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)3.398e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)8.306e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)8.306e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)8.306e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)8.306e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.73e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)2.34e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)2.34e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)5.579e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)5.579e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)8.118e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)2.862e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)5.207e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)5.207e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.113e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)7.113e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)7.113e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)3.229e-12
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)1.202e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.037e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)6.815e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)6.815e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)2.895e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.382e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.649e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.382e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.382e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)8.786e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)7.781e-11
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)8.696e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)7.779e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)3.57e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.005e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.005e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)9.605e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.326e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)6.862e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.651e-11