Overview Annotation GWAS Evidence Associated genes

P06538

Metabolite ID
P06538
Deionized mass
273.0671 Da
Average m/z
274.0759
Average RT
9.0875
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
23
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

23 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)3.887e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.222e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)6.269e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)4.167e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)6.704e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.405e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.516e-13
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)6.082e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)6.082e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.076e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.076e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)3.816e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.56e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.56e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.641e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)8.641e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)8.641e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.082e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)2.287e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.479e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)2.701e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)5.406e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)6.259e-11