Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P06443

Metabolite ID
P06443
Deionized mass
88.0310 Da
Average m/z
89.0377
Average RT
9.0483
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G096800 hypothetical protein AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2 4Chr04:8747857–8778229 (-)4.989e-11
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)8.339e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)7.626e-13
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 2Chr06:10709045–10716245 (-)4.945e-14
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)9.937e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)8.022e-12
Glyma.03G031700 hypothetical protein AT1G79600:AT1G79600:Protein kinase superfamily protein 1Chr03:3567906–3572939 (-)4.234e-13
Glyma.04G096500 hypothetical protein NA 1Chr04:8664088–8675605 (+)4.988e-11
Glyma.04G096600 hypothetical protein AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4 1Chr04:8693806–8724007 (-)4.989e-11
Glyma.04G096900 hypothetical protein NA 1Chr04:8778953–8796458 (-)4.989e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.55e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)7.431e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)9.269e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.272e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.272e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.272e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.15e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.928e-12
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)1.752e-11
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)4.342e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)8.305e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)8.305e-11
Glyma.06G129400 hypothetical protein AT5G24300:SS1:Glycogen/starch synthases, ADP-glucose type 1Chr06:10632042–10640023 (+)1.166e-11
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)3.156e-14
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)3.156e-14
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)1.302e-13
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)3.871e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.287e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.625e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.625e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)9.905e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.193e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)5.193e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)5.193e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.704e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.044e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)8.16e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)5.257e-11
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)1.702e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)2.523e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)3.018e-12
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)2.728e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)9.489e-11
Glyma.18G301600 hypothetical protein AT2G33490:AT2G33490:hydroxyproline-rich glycoprotein family protein 1Chr18:57939468–57945328 (+)1.952e-12
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)1.074e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.771e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.772e-13