Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P06019

Metabolite ID
P06019
Deionized mass
225.0627 Da
Average m/z
226.0724
Average RT
8.8753
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G107400 hypothetical protein AT2G20510:TIM44-1:translocase inner membrane subunit 44-1__AT2G36070:TIM44-2:translocase inner membrane subunit 44-2 2Chr04:11276495–11288391 (+)6.234e-11
Glyma.04G193700 hypothetical protein AT3G48500:PDE312:Nucleic acid-binding, OB-fold-like protein 2Chr04:46528402–46536243 (+)4.058e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.747e-13
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)9.502e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)9.502e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.401e-14
Glyma.03G173600 hypothetical protein AT3G53570:FC1:serine/threonine-protein kinase AFC1 1Chr03:38756369–38760896 (+)8.588e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)2.819e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)5.346e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)2.027e-12
Glyma.04G107100 hypothetical protein AT1G22060:AT1G22060:sporulation-specific protein 1Chr04:11239281–11250948 (-)6.234e-11
Glyma.04G107300 hypothetical protein AT1G36310:AT1G36310:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:11253648–11256731 (+)6.234e-11
Glyma.04G110600 hypothetical protein NA 1Chr04:12199550–12200299 (-)6.234e-11
Glyma.04G110700 hypothetical protein AT1G72190:AT1G72190:D-isomer specific 2-hydroxyacid dehydrogenase family protein 1Chr04:12206027–12222024 (-)6.234e-11
Glyma.04G111300 hypothetical protein AT1G71380:CEL3:cellulase 3 1Chr04:12306456–12310524 (+)5.296e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)2.835e-14
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)1.113e-13
Glyma.04G124600 hypothetical protein NA 1Chr04:16329983–16332898 (-)4.416e-11
Glyma.04G191400 hypothetical protein AT3G48380:AT3G48380:Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 1Chr04:46220242–46235879 (+)1.656e-11
Glyma.06G038900 hypothetical protein AT5G42700:AT5G42700:AP2/B3-like transcriptional factor family protein 1Chr06:2943383–2947586 (+)1.503e-11
Glyma.06G039000 hypothetical protein AT1G47380:AT1G47380:Protein phosphatase 2C family protein 1Chr06:2949704–2954653 (+)6.204e-12
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)6.672e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.326e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.326e-11
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)1.261e-12
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)8.145e-12
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)1.057e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)7.598e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.382e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.253e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.224e-13
Glyma.09G270000 hypothetical protein AT3G54220:SCR:GRAS family transcription factor 1Chr09:48704737–48708820 (-)7.448e-12
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)1.535e-11
Glyma.12G183700 hypothetical protein AT2G27600:SKD1:AAA-type ATPase family protein 1Chr12:34470517–34477475 (-)1.196e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)5.275e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)5.275e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)2.09e-12
Glyma.13G162300 hypothetical protein NA 1Chr13:27773991–27778719 (-)7.896e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)4.255e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)4.255e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)2.667e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)2.667e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)2.78e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)3.576e-12