Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P05766

Metabolite ID
P05766
Deionized mass
182.1025 Da
Average m/z
183.1103
Average RT
8.8245
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
42
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

42 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.864e-12
Glyma.08G123500 hypothetical protein NA 3Chr08:9494946–9505931 (-)5.19e-11
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)1.305e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)3.148e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.864e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)2.956e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)3.706e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)5.928e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.694e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)3.314e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)3.314e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)3.314e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)5.19e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)5.19e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)5.19e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)5.19e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)3.615e-13
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)7.28e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)4.498e-13
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)5.613e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.505e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)6.638e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)8.319e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)7.296e-12
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)1.794e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)7.718e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)7.718e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)3.148e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)5.228e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)5.228e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.514e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.546e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.514e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.514e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.25e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.04e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.636e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)7.616e-12
Glyma.20G098200 hypothetical protein AT1G56345:AT1G56345:Pseudouridine synthase family protein 1Chr20:34140611–34141832 (+)6.95e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)1.173e-12
Glyma.20G099200 hypothetical protein AT3G55410:AT3G55410:2-oxoglutarate dehydrogenase, E1 component__AT5G65750:AT5G65750:2-oxoglutarate dehydrogenase, E1 co… 1Chr20:34242852–34248956 (-)6.373e-12
Glyma.20G106400 hypothetical protein AT5G23590:AT5G23590:DNAJ heat shock N-terminal domain-containing protein 1Chr20:34888699–34893605 (-)7.51e-11