Overview Annotation GWAS Evidence Associated genes

P04842

Metabolite ID
P04842
Deionized mass
255.1086 Da
Average m/z
256.1153
Average RT
8.4038
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)6.3e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)9.121e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)5.264e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)5.264e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)5.264e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.254e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.018e-11
Glyma.14G033200 hypothetical protein NA 1Chr14:2405393–2413069 (+)2.845e-12