Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P04551

Metabolite ID
P04551
Deionized mass
193.1103 Da
Average m/z
194.1175
Average RT
8.1871
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
41
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

41 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 4Chr16:35831912–35835153 (+)1.237e-12
Glyma.16G196900 hypothetical protein NA 4Chr16:35841279–35846894 (-)1.289e-13
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)2.026e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)5.542e-13
Glyma.03G017800 hypothetical protein AT4G00770:TRM9:DUF4378 domain protein 1Chr03:1780719–1783735 (+)2.442e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)4.872e-12
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)5.394e-12
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)1.22e-13
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)3.135e-12
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)1.709e-15
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.393e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)9.396e-13
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.089e-12
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)5.075e-12
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)5.426e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.652e-14
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.652e-14
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.652e-14
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.652e-14
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.501e-14
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.878e-15
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)2.096e-11
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)9.13e-11
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)9.13e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)2.026e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)3.904e-14
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.7e-11
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 1Chr16:35782198–35790495 (-)3.031e-13
Glyma.18G044400 hypothetical protein AT3G03250:UGP1:UDP-GLUCOSE PYROPHOSPHORYLASE 1 1Chr18:3836270–3837813 (+)5.345e-14
Glyma.18G044600 hypothetical protein AT4G10710:SPT16:global transcription factor C 1Chr18:3846050–3851668 (+)3.994e-15
Glyma.18G044700 hypothetical protein NA 1Chr18:3846777–3847566 (+)3.994e-15
Glyma.18G044800 hypothetical protein NA 1Chr18:3854125–3856926 (+)3.994e-15
Glyma.18G044900 hypothetical protein AT1G66120:AAE11:AMP-dependent synthetase and ligase family protein__AT1G68270:AT1G68270:AMP-dependent synthetase and li… 1Chr18:3881382–3884162 (+)1.104e-15
Glyma.18G045000 hypothetical protein AT5G45130:RHA1:Ras small GTP-binding family protein 1Chr18:3889384–3895138 (-)9.807e-13
Glyma.18G045100 hypothetical protein AT1G65840:PAO4:polyamine oxidase 4 1Chr18:3897921–3904561 (-)9.807e-13
Glyma.18G045600 hypothetical protein NA 1Chr18:3947197–3952541 (+)1.031e-12
Glyma.18G045700 hypothetical protein NA 1Chr18:3956176–3958846 (+)6.996e-14
Glyma.18G045800 hypothetical protein AT3G02710:AT3G02710:ARM repeat superfamily protein 1Chr18:3960056–3964823 (-)1.031e-12
Glyma.18G057500 hypothetical protein AT2G30170:PBCP:Protein phosphatase 2C family protein 1Chr18:5080060–5083756 (-)1.409e-11
Glyma.18G057600 hypothetical protein AT1G07020:AT1G07020:uncharacterized protein 1Chr18:5084210–5084791 (+)1.409e-11
Glyma.18G057900 hypothetical protein NA 1Chr18:5092695–5097651 (-)1.409e-11