Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P04503

Metabolite ID
P04503
Deionized mass
321.1698 Da
Average m/z
322.1801
Average RT
8.1515
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
48
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

48 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)6.958e-15
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)3.058e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)3.058e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.719e-15
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)5.548e-12
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)3.664e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.155e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.155e-11
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)6.875e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)9.662e-14
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)4.537e-17
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.885e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)6.157e-13
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)7.255e-12
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)1.799e-13
Glyma.06G202200 hypothetical protein AT1G74310:HSP101:heat shock protein 101 1Chr06:18712866–18716868 (+)8.477e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)6.059e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)1.263e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)1.263e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)2.072e-12
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)5.026e-11
Glyma.10G229600 hypothetical protein AT4G23630:BTI1:VIRB2-interacting protein 1 1Chr10:45968793–45973482 (-)5.985e-11
Glyma.11G171200 hypothetical protein AT5G58610:AT5G58610:PHD finger transcription factor 1Chr11:18475119–18484515 (+)9.781e-12
Glyma.11G171500 hypothetical protein NA 1Chr11:18629660–18631015 (+)9.781e-12
Glyma.11G171800 hypothetical protein NA 1Chr11:18663180–18666591 (-)9.781e-12
Glyma.11G172200 hypothetical protein AT1G07110:F2KP:fructose-2,6-bisphosphatase 1Chr11:18702580–18708310 (+)9.781e-12
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)1.04e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)4.256e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)4.256e-12
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)1.187e-15
Glyma.13G049400 hypothetical protein AT2G20000:HBT:CDC27 family protein 1Chr13:14530308–14541307 (-)9.818e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)7.505e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)7.504e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.058e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)6.24e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)3.86e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)3.86e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.543e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.926e-13
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)3.592e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)9.842e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)9.842e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)3.373e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)7.141e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)4.997e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)1.524e-11
Glyma.20G112600 hypothetical protein AT5G04310:AT5G04310:Pectin lyase-like superfamily protein 1Chr20:35468911–35474203 (+)9.037e-12
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)2.986e-11