Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P04325

Metabolite ID
P04325
Deionized mass
319.0779 Da
Average m/z
320.0875
Average RT
8.0871
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 2Chr06:50401945–50408153 (+)6.569e-13
Glyma.07G078000 hypothetical protein NA 2Chr07:7121636–7126695 (+)2.036e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)9.572e-13
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.448e-12
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)3.858e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)7.756e-12
Glyma.02G121500 hypothetical protein NA 1Chr02:12065640–12082937 (+)1.976e-11
Glyma.02G121600 hypothetical protein AT1G26310:CAL:K-box region and MADS-box transcription factor family protein 1Chr02:12084714–12089043 (+)1.976e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)8.098e-14
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.564e-14
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)9.169e-14
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)3.674e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)1.352e-11
Glyma.07G071000 hypothetical protein AT4G00480:ATMYC1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr07:6464646–6470484 (+)2.648e-11
Glyma.08G113900 hypothetical protein AT3G13560:AT3G13560:O-Glycosyl hydrolases family 17 protein 1Chr08:8730526–8734718 (-)8.486e-12
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)1.999e-11
Glyma.09G065900 hypothetical protein NA 1Chr09:6419980–6421918 (+)1.724e-11
Glyma.09G066000 hypothetical protein NA 1Chr09:6431656–6439981 (-)1.724e-11
Glyma.09G066200 hypothetical protein AT5G57030:LUT2:Lycopene beta/epsilon cyclase protein 1Chr09:6475361–6486120 (+)1.724e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.154e-11
Glyma.12G001400 hypothetical protein AT1G72090:AT1G72090:Methylthiotransferase 1Chr12:113763–118480 (+)2.014e-12
Glyma.12G001600 PM27 seed maturation protein PM27 AT1G22600:AT1G22600:Late embryosis abundant protein (LEA) family protein__AT1G72100:AT1G72100:late embryosis abundant d… 1Chr12:127545–128932 (+)2.014e-12
Glyma.12G001700 hypothetical protein AT1G22570:AT1G22570:Major facilitator superfamily protein__AT1G22550:AT1G22550:Major facilitator superfamily protein 1Chr12:132389–134935 (+)2.014e-12
Glyma.12G002400 hypothetical protein AT5G47850:CCR4:CRINKLY4 related 4 1Chr12:197288–200229 (+)8.422e-12
Glyma.12G003500 hypothetical protein AT5G61670:AT5G61670:orange protein 1Chr12:285588–289372 (-)8.818e-13
Glyma.12G003900 hypothetical protein AT5G51550:EXL3:EXORDIUM like 3 1Chr12:302437–304546 (+)1.67e-12
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)7.974e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)4.464e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)7.571e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)9.572e-13
Glyma.14G179900 hypothetical protein NA 1Chr14:44227886–44232217 (-)8.908e-11
Glyma.15G108100 hypothetical protein NA 1Chr15:8500878–8505582 (-)4.945e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)9.211e-15
Glyma.15G125700 hypothetical protein AT1G55270:AT1G55270:Galactose oxidase/kelch repeat superfamily protein 1Chr15:9962401–9965136 (+)2.037e-11
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)3.9e-11
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)3.9e-11
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)2.735e-11
Glyma.16G013900 hypothetical protein AT1G17290:AlaAT1:alanine aminotransferas 1Chr16:1208240–1214310 (-)5.182e-11
Glyma.16G014100 hypothetical protein AT1G53830:PME2:pectin methylesterase 2 1Chr16:1222829–1228462 (-)5.182e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)7.834e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)5.661e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.88e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.88e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.294e-11
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)1.739e-13