P04092
Metabolite ID
P04092
Deionized mass
288.5715 Da
Average m/z
289.5791
Average RT
7.9662
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
102
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
102 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G147900 | hypothetical protein | NA | 3 | Chr16:30864919–30872425 (+) | 1.097e-12 | |
| Glyma.17G218600 | hypothetical protein | NA | 3 | Chr17:36975400–36982812 (-) | 3.594e-11 | |
| Glyma.20G107200 | hypothetical protein | AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein | 3 | Chr20:34984922–34988496 (+) | 4.027e-13 | |
| Glyma.06G313500 | hypothetical protein | NA | 2 | Chr06:50191600–50203098 (-) | 1.573e-12 | |
| Glyma.06G315100 | hypothetical protein | AT5G04930:ALA1:aminophospholipid ATPase 1 | 2 | Chr06:50401945–50408153 (+) | 6.121e-13 | |
| Glyma.10G081700 | hypothetical protein | NA | 2 | Chr10:9752508–9758422 (+) | 2.426e-13 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 5.462e-15 | |
| Glyma.14G149300 | hypothetical protein | NA | 2 | Chr14:32235308–32258014 (+) | 6.813e-14 | |
| Glyma.14G201600 | hypothetical protein | NA | 2 | Chr14:46703283–46706500 (+) | 1.599e-13 | |
| Glyma.16G031600 | hypothetical protein | NA | 2 | Chr16:2964569–2985013 (+) | 1.306e-11 | |
| Glyma.17G216700 | hypothetical protein | AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein | 2 | Chr17:36510062–36519347 (+) | 3.268e-12 | |
| Glyma.01G037200 | hypothetical protein | NA | 1 | Chr01:3946315–3948100 (-) | 8.621e-13 | |
| Glyma.01G120000 | hypothetical protein | NA | 1 | Chr01:41270985–41274854 (+) | 7.915e-12 | |
| Glyma.02G086900 | hypothetical protein | AT3G24130:AT3G24130:Pectin lyase-like superfamily protein | 1 | Chr02:7553127–7557516 (-) | 1.018e-13 | |
| Glyma.02G133800 | hypothetical protein | AT1G49660:CXE5:carboxyesterase 5 | 1 | Chr02:13850366–13851962 (-) | 9.486e-12 | |
| Glyma.02G205400 | hypothetical protein | AT5G57880:MPS1:multipolar spindle 1 | 1 | Chr02:39040135–39043181 (-) | 5.786e-14 | |
| Glyma.03G013500 | hypothetical protein | AT1G01700:ROPGEF2:RHO guanyl-nucleotide exchange factor 2 | 1 | Chr03:1370977–1375024 (+) | 9.143e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 3.125e-14 | |
| Glyma.03G136000 | hypothetical protein | NA | 1 | Chr03:35138670–35188160 (-) | 6.572e-12 | |
| Glyma.03G209700 | hypothetical protein | NA | 1 | Chr03:41646792–41648527 (+) | 8.273e-12 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 1.024e-11 | |
| Glyma.05G164700 | hypothetical protein | NA | 1 | Chr05:35543931–35549196 (-) | 6.183e-11 | |
| Glyma.05G224700 | hypothetical protein | NA | 1 | Chr05:40351005–40361888 (+) | 5.794e-11 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.952e-11 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 1.223e-13 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 2.766e-11 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 2.766e-11 | |
| Glyma.06G126500 | hypothetical protein | AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr06:10367536–10373426 (-) | 1.357e-11 | |
| Glyma.06G126900 | hypothetical protein | AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) | 1 | Chr06:10403126–10408307 (-) | 2.883e-11 | |
| Glyma.06G129400 | hypothetical protein | AT5G24300:SS1:Glycogen/starch synthases, ADP-glucose type | 1 | Chr06:10632042–10640023 (+) | 1.883e-11 | |
| Glyma.06G129800 | hypothetical protein | AT5G53030:AT5G53030:uncharacterized protein | 1 | Chr06:10667029–10669377 (+) | 3.632e-13 | |
| Glyma.06G130100 | hypothetical protein | AT3G49290:ABIL2:ABL interactor-like protein 2 | 1 | Chr06:10695256–10699675 (+) | 3.632e-13 | |
| Glyma.06G130300 | hypothetical protein | AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr06:10709045–10716245 (-) | 3.74e-13 | |
| Glyma.06G130700 | hypothetical protein | AT5G53060:RCF3:RNA-binding KH domain-containing protein | 1 | Chr06:10742110–10747597 (-) | 4.237e-13 | |
| Glyma.06G130900 | hypothetical protein | AT4G27800:TAP38:thylakoid-associated phosphatase 38 | 1 | Chr06:10753446–10757827 (+) | 6.673e-13 | |
| Glyma.06G316500 | hypothetical protein | AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein | 1 | Chr06:50531222–50538652 (-) | 3e-11 | |
| Glyma.07G015700 | hypothetical protein | AT1G79750:NADP-ME4:NADP-malic enzyme 4 | 1 | Chr07:1244977–1251198 (-) | 8.857e-13 | |
| Glyma.08G112600 | hypothetical protein | NA | 1 | Chr08:8660670–8663379 (-) | 3.246e-14 | |
| Glyma.08G112700 | hypothetical protein | NA | 1 | Chr08:8661027–8661191 (+) | 3.246e-14 | |
| Glyma.08G113900 | hypothetical protein | AT3G13560:AT3G13560:O-Glycosyl hydrolases family 17 protein | 1 | Chr08:8730526–8734718 (-) | 3.231e-11 | |
| Glyma.09G080200 | hypothetical protein | NA | 1 | Chr09:9256042–9263239 (-) | 2.325e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 2.067e-12 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 2.838e-13 | |
| Glyma.09G268900 | hypothetical protein | NA | 1 | Chr09:48638803–48644136 (+) | 5.728e-11 | |
| Glyma.09G270400 | hypothetical protein | NA | 1 | Chr09:48735991–48740879 (+) | 8.147e-11 | |
| Glyma.10G078700 | hypothetical protein | NA | 1 | Chr10:8882318–8903950 (+) | 1.825e-11 | |
| Glyma.10G079100 | hypothetical protein | NA | 1 | Chr10:8960669–8962364 (-) | 1.825e-11 | |
| Glyma.10G079800 | hypothetical protein | NA | 1 | Chr10:9223520–9228511 (-) | 1.825e-11 | |
| Glyma.10G080000 | hypothetical protein | AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… | 1 | Chr10:9258476–9260697 (-) | 1.825e-11 | |
| Glyma.10G081200 | hypothetical protein | NA | 1 | Chr10:9600771–9603988 (-) | 8.123e-12 | |
| Glyma.10G082100 | hypothetical protein | AT3G05680:EMB2016:embryo defective 2016 | 1 | Chr10:9934486–9960586 (-) | 2.871e-11 | |
| Glyma.10G082200 | hypothetical protein | NA | 1 | Chr10:9967027–9970045 (-) | 2.415e-11 | |
| Glyma.11G048300 | hypothetical protein | AT4G37640:ACA2:calcium ATPase 2 | 1 | Chr11:3601241–3607177 (+) | 7.799e-11 | |
| Glyma.11G050300 | hypothetical protein | AT2G23093:AT2G23093:Major facilitator superfamily protein | 1 | Chr11:3765453–3771565 (+) | 3.356e-11 | |
| Glyma.11G050500 | hypothetical protein | AT5G67370:CGLD27:DUF1230 family protein (DUF1230) | 1 | Chr11:3778152–3782174 (+) | 3.356e-11 | |
| Glyma.11G050600 | hypothetical protein | NA | 1 | Chr11:3779988–3786583 (-) | 3.356e-11 | |
| Glyma.11G051600 | hypothetical protein | NA | 1 | Chr11:3857225–3859564 (-) | 3.356e-11 | |
| Glyma.11G125600 | hypothetical protein | AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein | 1 | Chr11:9540747–9545520 (-) | 2.934e-11 | |
| Glyma.11G127100 | hypothetical protein | AT1G06040:STO:B-box zinc finger family protein | 1 | Chr11:9656242–9659517 (+) | 1.685e-11 | |
| Glyma.11G127200 | hypothetical protein | AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein | 1 | Chr11:9660434–9665570 (-) | 1.685e-11 | |
| Glyma.11G127300 | hypothetical protein | AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein | 1 | Chr11:9667918–9671917 (-) | 1.685e-11 | |
| Glyma.12G007700 | hypothetical protein | NA | 1 | Chr12:563263–567108 (-) | 6.398e-11 | |
| Glyma.12G008300 | hypothetical protein | AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein | 1 | Chr12:613939–617457 (+) | 5.727e-13 | |
| Glyma.13G180300 | hypothetical protein | NA | 1 | Chr13:29378090–29379784 (-) | 4.021e-11 | |
| Glyma.13G181100 | hypothetical protein | AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein | 1 | Chr13:29426889–29433599 (-) | 2.656e-13 | |
| Glyma.13G183400 | hypothetical protein | NA | 1 | Chr13:29666942–29670201 (+) | 9.223e-12 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 6.42e-11 | |
| Glyma.14G094200 | hypothetical protein | AT5G11840:AT5G11840:YCF36, putative (DUF1230) | 1 | Chr14:8770378–8774149 (-) | 2.936e-11 | |
| Glyma.14G094300 | hypothetical protein | NA | 1 | Chr14:8771316–8772515 (+) | 2.936e-11 | |
| Glyma.14G094900 | hypothetical protein | AT1G60960:IRT3:iron regulated transporter 3 | 1 | Chr14:8824846–8827258 (-) | 1.297e-11 | |
| Glyma.14G135100 | hypothetical protein | AT4G31540:EXO70G1:exocyst subunit exo70 family protein G1 | 1 | Chr14:23623422–23626499 (-) | 1.301e-11 | |
| Glyma.14G148800 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr14:32154755–32157298 (+) | 6.813e-14 | |
| Glyma.14G201700 | hypothetical protein | NA | 1 | Chr14:46711634–46715644 (-) | 1.599e-13 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 4.14e-15 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 1.114e-16 | |
| Glyma.15G125700 | hypothetical protein | AT1G55270:AT1G55270:Galactose oxidase/kelch repeat superfamily protein | 1 | Chr15:9962401–9965136 (+) | 7.158e-11 | |
| Glyma.16G019400 | SHAT1-5 | NAC domain-containing protein 43-like | NA | 1 | Chr16:1725643–1728272 (+) | 1.745e-13 |
| Glyma.16G020200 | hypothetical protein | NA | 1 | Chr16:1828561–1835982 (-) | 9.791e-11 | |
| Glyma.16G050500 | AFB3B | auxin signaling F-box 3 protein | AT3G26810:AFB2:auxin signaling F-box 2 | 1 | Chr16:4853237–4856710 (+) | 1.131e-11 |
| Glyma.16G165300 | hypothetical protein | NA | 1 | Chr16:32447317–32449688 (-) | 7.84e-11 | |
| Glyma.16G189500 | hypothetical protein | NA | 1 | Chr16:35202920–35206459 (-) | 2.177e-11 | |
| Glyma.17G118900 | hypothetical protein | NA | 1 | Chr17:9401882–9402864 (+) | 8.297e-14 | |
| Glyma.17G215500 | KNAT5 | NA | 1 | Chr17:36212363–36217688 (-) | 7.132e-13 | |
| Glyma.17G218700 | hypothetical protein | NA | 1 | Chr17:36986191–36991558 (-) | 3.594e-11 | |
| Glyma.17G218800 | Peptidyl-prolyl cis-trans isomerase CYP57 | AT4G33060:AT4G33060:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | 1 | Chr17:37027171–37033720 (-) | 4.344e-11 | |
| Glyma.18G006800 | hypothetical protein | AT1G67370:ASY1:DNA-binding HORMA family protein | 1 | Chr18:495989–502111 (-) | 2.314e-11 | |
| Glyma.18G021700 | hypothetical protein | NA | 1 | Chr18:1590986–1596262 (-) | 1.641e-11 | |
| Glyma.18G044100 | hypothetical protein | NA | 1 | Chr18:3809348–3812858 (-) | 4.515e-12 | |
| Glyma.18G044200 | hypothetical protein | AT5G17300:RVE1:Homeodomain-like superfamily protein | 1 | Chr18:3813589–3817289 (-) | 4.515e-12 | |
| Glyma.19G011900 | hypothetical protein | AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… | 1 | Chr19:1148510–1149495 (+) | 4.207e-11 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 4.583e-11 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 4.583e-11 | |
| Glyma.20G022500 | hypothetical protein | NA | 1 | Chr20:2342943–2353164 (+) | 1.02e-11 | |
| Glyma.20G027600 | hypothetical protein | NA | 1 | Chr20:3140862–3142270 (+) | 1.029e-11 | |
| Glyma.20G106900 | hypothetical protein | NA | 1 | Chr20:34962043–34967985 (+) | 2.216e-11 | |
| Glyma.20G107500 | hypothetical protein | AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr20:35011922–35015196 (-) | 3.856e-14 | |
| Glyma.20G107700 | hypothetical protein | AT2G16860:AT2G16860:GCIP-interacting family protein | 1 | Chr20:35033414–35036538 (+) | 4.03e-13 | |
| Glyma.20G108900 | hypothetical protein | AT4G24175:AT4G24175:kinesin-like protein | 1 | Chr20:35119868–35122488 (+) | 4.284e-11 | |
| Glyma.20G109100 | hypothetical protein | AT1G14590:AT1G14590:Nucleotide-diphospho-sugar transferase family protein | 1 | Chr20:35166747–35171332 (+) | 2.814e-11 | |
| Glyma.20G109600 | hypothetical protein | AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 | 1 | Chr20:35200934–35205885 (-) | 5.758e-13 | |
| Glyma.20G109800 | hypothetical protein | AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr20:35213258–35219502 (+) | 2.689e-12 | |
| Glyma.20G110000 | hypothetical protein | AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 | 1 | Chr20:35229423–35231861 (+) | 5.808e-11 |