P03902
Metabolite ID
P03902
Deionized mass
261.1359 Da
Average m/z
262.1436
Average RT
7.8946
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
82
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
82 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G209300 | hypothetical protein | NA | 5 | Chr16:36856833–36863994 (-) | 1.118e-12 | |
| Glyma.16G210200 | hypothetical protein | NA | 5 | Chr16:36933402–36938940 (+) | 7.653e-12 | |
| Glyma.16G111500 | hypothetical protein | AT4G35500:AT4G35500:Protein kinase superfamily protein | 4 | Chr16:24626024–24635513 (+) | 3.37e-13 | |
| Glyma.06G201700 | hypothetical protein | NA | 3 | Chr06:18577883–18617874 (+) | 4.334e-13 | |
| Glyma.06G305700 | hypothetical protein | AT2G05710:ACO3:aconitase 3 | 3 | Chr06:49451501–49461369 (-) | 7.321e-13 | |
| Glyma.06G206000 | hypothetical protein | AT5G08110:AT5G08110:UBQ, helicase-c and DEAD-like helicase domain-containing protein | 2 | Chr06:19693187–19711341 (-) | 6.959e-11 | |
| Glyma.06G209300 | hypothetical protein | NA | 2 | Chr06:20573671–20581076 (-) | 5.314e-12 | |
| Glyma.09G282900 | hypothetical protein | AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 | 2 | Chr09:49863377–49871270 (+) | 4.832e-12 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 2 | Chr13:24677399–24693129 (-) | 1.166e-11 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 1.799e-13 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 1.799e-13 | |
| Glyma.01G123900 | hypothetical protein | AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr01:42831758–42837350 (+) | 2.144e-11 | |
| Glyma.01G124100 | hypothetical protein | NA | 1 | Chr01:42886229–42892204 (-) | 7.593e-11 | |
| Glyma.02G133800 | hypothetical protein | AT1G49660:CXE5:carboxyesterase 5 | 1 | Chr02:13850366–13851962 (-) | 4.326e-13 | |
| Glyma.03G016700 | hypothetical protein | AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr03:1683395–1688893 (-) | 5e-12 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 1.455e-12 | |
| Glyma.03G135300 | hypothetical protein | NA | 1 | Chr03:35092248–35097578 (+) | 4.785e-12 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 8.212e-13 | |
| Glyma.04G084300 | hypothetical protein | AT2G25800:AT2G25800:elongation factor Ts (DUF810) | 1 | Chr04:7153009–7158438 (+) | 1.973e-11 | |
| Glyma.04G084800 | hypothetical protein | AT5G11630:NOXY2:uncharacterized protein | 1 | Chr04:7187985–7192897 (+) | 6.301e-11 | |
| Glyma.05G219200 | hypothetical protein | NA | 1 | Chr05:39875137–39879113 (-) | 6.487e-11 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.095e-13 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 2.208e-22 | |
| Glyma.06G200200 | hypothetical protein | NA | 1 | Chr06:18327920–18331068 (-) | 1.457e-11 | |
| Glyma.06G202000 | hypothetical protein | AT5G07940:AT5G07940:dentin sialophosphoprotein-like protein | 1 | Chr06:18655235–18667810 (-) | 4.702e-12 | |
| Glyma.06G204200 | hypothetical protein | AT5G08050:AT5G08050:wiskott-aldrich syndrome family protein, putative (DUF1118) | 1 | Chr06:19170925–19173352 (+) | 3.715e-11 | |
| Glyma.06G205800 | AP1A | agamous-like MADS-box | AT5G60910:AGL8:AGAMOUS-like 8 | 1 | Chr06:19583729–19590906 (+) | 6.959e-11 |
| Glyma.06G207900 | hypothetical protein | NA | 1 | Chr06:20278974–20282107 (-) | 9.105e-12 | |
| Glyma.06G208000 | hypothetical protein | AT1G74000:SS3:strictosidine synthase 3 | 1 | Chr06:20286288–20288769 (+) | 9.105e-12 | |
| Glyma.06G208900 | hypothetical protein | NA | 1 | Chr06:20515068–20521900 (-) | 9.105e-12 | |
| Glyma.06G209400 | hypothetical protein | NA | 1 | Chr06:20622369–20629712 (+) | 9.105e-12 | |
| Glyma.06G209600 | hypothetical protein | AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr06:20638577–20641470 (+) | 9.105e-12 | |
| Glyma.06G210000 | hypothetical protein | NA | 1 | Chr06:20706632–20708144 (-) | 9.105e-12 | |
| Glyma.06G210100 | hypothetical protein | NA | 1 | Chr06:20725481–20728890 (-) | 9.105e-12 | |
| Glyma.06G210400 | hypothetical protein | AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit | 1 | Chr06:20768340–20778709 (-) | 9.105e-12 | |
| Glyma.06G210900 | hypothetical protein | AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein | 1 | Chr06:20942818–20945744 (+) | 9.105e-12 | |
| Glyma.06G211500 | hypothetical protein | AT5G19950:AT5G19950:tudor domain protein (DUF1767) | 1 | Chr06:21104409–21114116 (-) | 9.105e-12 | |
| Glyma.06G211700 | hypothetical protein | NA | 1 | Chr06:21226061–21226529 (-) | 1.866e-11 | |
| Glyma.06G211800 | hypothetical protein | NA | 1 | Chr06:21237649–21239875 (+) | 1.866e-11 | |
| Glyma.06G213600 | hypothetical protein | NA | 1 | Chr06:21713618–21726865 (+) | 1.866e-11 | |
| Glyma.06G275800 | hypothetical protein | AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta | 1 | Chr06:46677753–46682900 (-) | 1.485e-12 | |
| Glyma.06G303700 | hypothetical protein | AT1G05230:HDG2:homeodomain GLABROUS 2 | 1 | Chr06:49315918–49324382 (+) | 4.346e-12 | |
| Glyma.06G303800 | hypothetical protein | AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative | 1 | Chr06:49328417–49330906 (-) | 4.346e-12 | |
| Glyma.06G305300 | hypothetical protein | NA | 1 | Chr06:49431590–49435985 (-) | 7.321e-13 | |
| Glyma.06G305600 | hypothetical protein | NA | 1 | Chr06:49446542–49450635 (-) | 7.321e-13 | |
| Glyma.07G015700 | hypothetical protein | AT1G79750:NADP-ME4:NADP-malic enzyme 4 | 1 | Chr07:1244977–1251198 (-) | 2.913e-11 | |
| Glyma.07G095400 | hypothetical protein | NA | 1 | Chr07:8914725–8920132 (+) | 1.048e-11 | |
| Glyma.08G202000 | hypothetical protein | AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | 1 | Chr08:16375907–16384294 (-) | 1.626e-11 | |
| Glyma.10G078700 | hypothetical protein | NA | 1 | Chr10:8882318–8903950 (+) | 9.47e-16 | |
| Glyma.10G079100 | hypothetical protein | NA | 1 | Chr10:8960669–8962364 (-) | 9.47e-16 | |
| Glyma.10G079800 | hypothetical protein | NA | 1 | Chr10:9223520–9228511 (-) | 9.47e-16 | |
| Glyma.10G080000 | hypothetical protein | AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… | 1 | Chr10:9258476–9260697 (-) | 9.47e-16 | |
| Glyma.10G080400 | hypothetical protein | AT2G33990:iqd9:IQ-domain 9 | 1 | Chr10:9454616–9455485 (+) | 8.053e-12 | |
| Glyma.10G081200 | hypothetical protein | NA | 1 | Chr10:9600771–9603988 (-) | 1.489e-12 | |
| Glyma.10G081300 | hypothetical protein | NA | 1 | Chr10:9621308–9625766 (-) | 8.053e-12 | |
| Glyma.10G081700 | hypothetical protein | NA | 1 | Chr10:9752508–9758422 (+) | 1.895e-12 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 7.959e-11 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 7.959e-11 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 7.077e-11 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 7.077e-11 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 1.166e-11 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 8.467e-12 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 8.467e-12 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 1.799e-13 | |
| Glyma.13G201600 | hypothetical protein | NA | 1 | Chr13:31521512–31522992 (+) | 1.044e-11 | |
| Glyma.16G028100 | hypothetical protein | AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein | 1 | Chr16:2725294–2733429 (-) | 2.691e-12 | |
| Glyma.16G031600 | hypothetical protein | NA | 1 | Chr16:2964569–2985013 (+) | 1.351e-11 | |
| Glyma.16G050500 | AFB3B | auxin signaling F-box 3 protein | AT3G26810:AFB2:auxin signaling F-box 2 | 1 | Chr16:4853237–4856710 (+) | 4.292e-11 |
| Glyma.16G057600 | hypothetical protein | AT3G27170:CLC-B:chloride channel B | 1 | Chr16:5650591–5655830 (+) | 8.398e-11 | |
| Glyma.16G105400 | hypothetical protein | AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr16:21357465–21364357 (-) | 6.888e-11 | |
| Glyma.16G111100 | hypothetical protein | NA | 1 | Chr16:24438458–24444801 (+) | 3.37e-13 | |
| Glyma.16G111400 | hypothetical protein | AT4G35510:AT4G35510:PHD finger-like protein | 1 | Chr16:24546422–24549336 (+) | 4.519e-12 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 1.263e-11 | |
| Glyma.16G196900 | hypothetical protein | NA | 1 | Chr16:35841279–35846894 (-) | 6.596e-11 | |
| Glyma.16G208500 | EIF6 | AT3G55620:eIF6A:Translation initiation factor IF6 | 1 | Chr16:36806718–36809299 (+) | 1.846e-12 | |
| Glyma.16G209000 | hypothetical protein | NA | 1 | Chr16:36841786–36845498 (-) | 4.796e-11 | |
| Glyma.16G209900 | hypothetical protein | NA | 1 | Chr16:36919141–36924601 (+) | 7.654e-12 | |
| Glyma.16G210300 | hypothetical protein | AT1G73340:AT1G73340:Cytochrome P450 superfamily protein | 1 | Chr16:36943073–36948828 (+) | 1.566e-13 | |
| Glyma.16G210400 | hypothetical protein | AT1G73350:AT1G73350:ankyrin repeat protein | 1 | Chr16:36949685–36953467 (+) | 1.566e-13 | |
| Glyma.18G045700 | hypothetical protein | NA | 1 | Chr18:3956176–3958846 (+) | 4.493e-12 | |
| Glyma.18G298600 | hypothetical protein | AT1G44960:AT1G44960:SNARE associated Golgi protein family | 1 | Chr18:57614292–57617223 (+) | 2.914e-13 | |
| Glyma.18G298800 | hypothetical protein | NA | 1 | Chr18:57633577–57639546 (+) | 4.685e-12 |