Overview Annotation GWAS Evidence Associated genes

P02854

Metabolite ID
P02854
Deionized mass
118.0089 Da
Average m/z
119.0167
Average RT
5.9405
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
22
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

22 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)9.827e-12
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)8.613e-11
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)1.837e-11
Glyma.03G017800 hypothetical protein AT4G00770:TRM9:DUF4378 domain protein 1Chr03:1780719–1783735 (+)3.707e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.071e-13
Glyma.03G073300 hypothetical protein AT1G79210:AT1G79210:N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 1Chr03:17770362–17785644 (+)4.805e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)8.95e-11
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 1Chr04:1101709–1106543 (+)3.911e-11
Glyma.04G014600 hypothetical protein NA 1Chr04:1119108–1123175 (+)3.911e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)8.52e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.526e-14
Glyma.07G069600 hypothetical protein AT4G00370:ANTR2:Major facilitator superfamily protein 1Chr07:6307073–6313498 (-)6.02e-11
Glyma.09G209200 hypothetical protein AT1G32160:AT1G32160:beta-casein (DUF760) 1Chr09:43361634–43365478 (-)8.023e-11
Glyma.10G156300 hypothetical protein AT3G05210:ERCC1:nucleotide repair protein 1Chr10:39053531–39057116 (-)3.454e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)5.911e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)4.757e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.12e-14
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)8.12e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)8.12e-14
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)3.758e-11
Glyma.16G121400 hypothetical protein NA 1Chr16:26989007–26992349 (+)7.621e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)2.563e-12