Overview Annotation GWAS Evidence Associated genes

P02190

Metabolite ID
P02190
Deionized mass
308.9802 Da
Average m/z
309.9890
Average RT
4.9992
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
85
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

85 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4Chr19:1134716–1143232 (+)7.404e-12
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)1.373e-12
Glyma.05G149900 hypothetical protein NA 2Chr05:34389242–34393621 (-)2.527e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)3.951e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)3.951e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)4.248e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)5.803e-13
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)8.662e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)8.611e-12
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)1.373e-12
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)2.935e-12
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)6.167e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.919e-14
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)1.143e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)6.017e-12
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)8.397e-12
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)5.293e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.394e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.394e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)6.886e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)5.285e-12
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)1.22e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)1.219e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)3.56e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)3.432e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.342e-12
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)6.507e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.332e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.425e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)5.292e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)2.729e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.97e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.97e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.97e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.97e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.576e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.344e-13
Glyma.10G274700 hypothetical protein AT1G68560:XYL1:alpha-xylosidase 1__AT3G45940:AT3G45940:Glycosyl hydrolases family 31 protein 1Chr10:49769554–49774168 (-)7.896e-13
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)5.836e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.932e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.932e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.932e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.932e-11
Glyma.11G095000 hypothetical protein NA 1Chr11:7206492–7209711 (-)8.542e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)1.17e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)8.786e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)8.786e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)8.786e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.504e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.47e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.47e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.326e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.326e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)5.245e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)3.951e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)3.951e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.545e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)7.023e-13
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)8.221e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.628e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.117e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)2.422e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)4.248e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.976e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)5.68e-12
Glyma.15G152200 hypothetical protein NA 1Chr15:12632591–12637748 (+)7.303e-11
Glyma.15G152400 hypothetical protein NA 1Chr15:12641790–12646649 (+)7.303e-11
Glyma.15G152800 hypothetical protein NA 1Chr15:12669438–12671888 (+)7.303e-11
Glyma.15G152900 hypothetical protein AT4G15755:AT4G15755:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr15:12680146–12681864 (-)5.123e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)1.79e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)2.323e-11
Glyma.16G137000 hypothetical protein NA 1Chr16:29418205–29421765 (-)2.48e-11
Glyma.16G137100 hypothetical protein NA 1Chr16:29421091–29421534 (+)2.48e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.859e-12
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)3.113e-11
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)1.488e-11
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)1.488e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)5.636e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)5.636e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)4.646e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)5.803e-13
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 1Chr19:1148510–1149495 (+)5.35e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.118e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.118e-13
Glyma.19G246100 hypothetical protein NA 1Chr19:49285339–49287223 (+)2.132e-11