Overview Annotation GWAS Evidence Associated genes

P01950

Metabolite ID
P01950
Deionized mass
438.1415 Da
Average m/z
439.1501
Average RT
4.6555
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
37
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

37 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)6.403e-13
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)3.76e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.77e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.77e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)6.557e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)3.356e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.318e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.023e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.023e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)5.664e-12
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)5.176e-12
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)2.384e-13
Glyma.11G037100 hypothetical protein AT2G35660:CTF2A:FAD/NAD(P)-binding oxidoreductase family protein 1Chr11:2678678–2681764 (-)3.209e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)5.727e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)5.727e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)5.883e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)5.883e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)6.403e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)6.414e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.656e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.97e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)4.905e-11
Glyma.15G257500 hypothetical protein NA 1Chr15:48713244–48717192 (+)6.658e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)2.082e-12
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)5.912e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)3.76e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)1.614e-13
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)6.649e-13
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)2.696e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)6.087e-12
Glyma.16G143400 hypothetical protein NA 1Chr16:30337469–30338390 (-)5.325e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)1.215e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)4.931e-13
Glyma.18G266800 hypothetical protein NA 1Chr18:55120594–55123535 (+)5.821e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.645e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.645e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)2.461e-12