Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P01259

Metabolite ID
P01259
Deionized mass
220.0088 Da
Average m/z
221.0143
Average RT
3.8511
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
50
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

50 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 3Chr10:48805999–48811533 (-)4.332e-13
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 2Chr12:34708678–34710549 (+)6.732e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.236e-12
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)7.352e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)7.656e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)2.692e-13
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)4.713e-11
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)8.824e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)3.154e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)4.796e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)8.85e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)4.094e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)9.196e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)9.196e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)9.196e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)3.864e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)7.48e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)7.48e-13
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)5.479e-14
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.415e-13
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)1.833e-13
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)1.833e-13
Glyma.07G075400 hypothetical protein NA 1Chr07:6849233–6853058 (+)1.318e-11
Glyma.07G078300 hypothetical protein NA 1Chr07:7150800–7154478 (-)3.641e-12
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)1.665e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)6.016e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.255e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.126e-12
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)5.992e-13
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)5.992e-13
Glyma.10G264300 Mediator of RNA polymerase II transcription subunit 21 AT4G04780:MED21:mediator 21 1Chr10:48858818–48862498 (-)2.647e-12
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)4.803e-15
Glyma.10G266400 hypothetical protein NA 1Chr10:48984735–48993690 (+)1.832e-14
Glyma.12G186000 hypothetical protein AT5G09225:AT5G09225:uncharacterized protein 1Chr12:34690356–34692672 (+)9.292e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)7.598e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.178e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)4.178e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)4.178e-11
Glyma.13G185400 hypothetical protein NA 1Chr13:29936606–29937420 (+)6.341e-11
Glyma.14G013500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 1Chr14:1009519–1014238 (+)9.738e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)4.246e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)3.279e-13
Glyma.15G150300 hypothetical protein AT5G49130:AT5G49130:MATE efflux family protein 1Chr15:12416065–12418420 (-)1.2e-12
Glyma.15G150400 hypothetical protein AT3G06840:AT3G06840:uncharacterized protein 1Chr15:12436393–12437800 (-)6.291e-12
Glyma.16G041700 hypothetical protein AT1G64770:PnsB2:NDH-dependent cyclic electron flow 1 1Chr16:3909907–3912569 (+)2.809e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)9.761e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)1.271e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.462e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.462e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)2.462e-11