Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P01112

Metabolite ID
P01112
Deionized mass
277.1120 Da
Average m/z
278.1200
Average RT
3.7825
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
63
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

63 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G121500 hypothetical protein NA 3Chr02:12065640–12082937 (+)9.677e-12
Glyma.07G068800 hypothetical protein NA 3Chr07:6211775–6221107 (-)7.655e-11
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)8.297e-12
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)1.508e-13
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.508e-13
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)2.603e-11
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)2.612e-13
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)1.639e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.197e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.197e-14
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)7.215e-11
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)8.297e-12
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)4.662e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)3.54e-14
Glyma.02G203800 hypothetical protein AT4G30935:WRKY32:WRKY DNA-binding protein 32 1Chr02:38920714–38930381 (+)6.751e-11
Glyma.03G020800 hypothetical protein AT3G61050:NTMC2T4:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr03:2124895–2135692 (-)3.537e-11
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)2.254e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.259e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)2.249e-12
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)5.189e-12
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)4.356e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.006e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.914e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)4.182e-12
Glyma.07G068000 hypothetical protein AT3G61460:BRH1: 1Chr07:6128862–6129740 (+)1.222e-12
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 1Chr07:6146155–6148036 (-)9.825e-13
Glyma.07G068600 hypothetical protein NA 1Chr07:6192764–6197166 (+)4.12e-12
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)7.655e-11
Glyma.07G071000 hypothetical protein AT4G00480:ATMYC1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr07:6464646–6470484 (+)2.155e-13
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)2.457e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.508e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.508e-13
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)1.503e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.508e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.737e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)7.979e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)3.739e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)3.739e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.862e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.862e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.862e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.862e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.517e-11
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 1Chr10:9934486–9960586 (-)3.717e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)2.27e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)5.784e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)5.784e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)5.784e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.639e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.2e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.2e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.197e-14
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)7.831e-12
Glyma.13G185400 hypothetical protein NA 1Chr13:29936606–29937420 (+)8.428e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)1.141e-14
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)1.647e-11
Glyma.14G071900 hypothetical protein AT1G19650:AT1G19650:Sec14p-like phosphatidylinositol transfer family protein__AT1G75370:AT1G75370:Sec14p-like phosphati… 1Chr14:6043655–6049030 (+)1.647e-11
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… 1Chr14:6059598–6063755 (-)1.669e-13
Glyma.14G072600 hypothetical protein NA 1Chr14:6097297–6102480 (-)1.693e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.278e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.278e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.278e-11
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)6.228e-11